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STOMACH CANCER - Interactive survival scatter ploti
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
: Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A 5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A 5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as median FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average FPKM
2174.2
Number of samples
354
Samples
Sample
Description
FPKM
TCGA-CD-8531-01A
66 years, female, asian, stage:iiia, alive, 383 days
6161.5
TCGA-VQ-A94P-01A
57 years, male, white, dead, 81 days
5067.7
TCGA-RD-A8N2-01A
59 years, female, white, stage:ib, alive, 3540 days
4930.2
TCGA-D7-A747-01A
57 years, male, white, stage:iib, dead, 255 days
4171.5
TCGA-CD-5798-01A
83 years, male, asian, stage:ii, alive, 408 days
4070.7
TCGA-CD-A489-01A
58 years, male, asian, stage:iia, dead, 344 days
3973.8
TCGA-B7-A5TK-01A
51 years, male, white, stage:iiia, alive, 288 days
3791.9
TCGA-RD-A8N4-01A
58 years, female, white, stage:iiia, alive, 2171 days
3739.3
TCGA-VQ-A92D-01A
67 years, male, white, stage:ib, alive, 2032 days
3735.5
TCGA-FP-8209-01A
49 years, male, white, stage:ib, dead, 1811 days
3734.4
TCGA-BR-A4IV-01A
47 years, male, asian, stage:iiib, dead, 869 days
3724.4
TCGA-BR-A4J9-01A
55 years, male, white, stage:iia, alive, 14 days
3720.0
TCGA-RD-A7BW-01A
68 years, female, white, stage:ib, dead, 156 days
3686.2
TCGA-VQ-A8PB-01A
65 years, female, white, stage:ii, dead, 1043 days
3679.2
TCGA-CG-5724-01A
59 years, male, stage:iv, dead, 366 days
3625.5
TCGA-BR-8371-01A
62 years, male, white, stage:iiib, dead, 359 days
3603.5
TCGA-BR-8297-01A
58 years, male, white, stage:iiic, alive, 225 days
3590.6
TCGA-HU-A4H3-01A
56 years, female, asian, stage:iiic, alive, 882 days
3559.6
TCGA-HU-A4GQ-01A
71 years, male, asian, stage:iiic, dead, 3 days
3537.0
TCGA-CD-A48C-01A
80 years, female, asian, stage:iib, dead, 353 days
3526.5
TCGA-VQ-AA68-01A
52 years, female, white, stage:iiic, alive, 1328 days
3520.1
TCGA-VQ-A8PO-01A
74 years, male, white, stage:iib, dead, 282 days
3479.2
TCGA-CD-5804-01A
90 years, male, asian, alive, 368 days
3440.7
TCGA-HU-8602-01A
58 years, female, asian, stage:iib, alive, 679 days
3435.5
TCGA-BR-8366-01A
80 years, female, white, stage:iia, alive, 29 days
3428.5
TCGA-HU-A4GP-01A
62 years, female, asian, stage:iia, alive, 273 days
3428.3
TCGA-SW-A7EA-01A
61 years, female, white, stage:ib, alive, 579 days
3406.0
TCGA-IN-8462-01A
80 years, male, white, stage:iib, alive, 572 days
3403.7
TCGA-VQ-AA6A-01A
56 years, male, white, stage:iiic, alive, 1184 days
3382.2
TCGA-BR-A44T-01A
53 years, female, white, stage:iia, alive, 1038 days
3379.9
TCGA-BR-A4J5-01A
56 years, male, asian, stage:iiia, alive, 862 days
3328.0
TCGA-ZQ-A9CR-01A
79 years, female, white, stage:iiic, dead, 24 days
3303.0
TCGA-CD-8524-01A
61 years, female, asian, stage:ii, alive, 388 days
3294.4
TCGA-BR-6802-01A
65 years, male, white, stage:iiia, alive, 940 days
3236.8
TCGA-BR-8380-01A
55 years, male, white, stage:iiic, dead, 21 days
3215.4
TCGA-VQ-A91Y-01A
67 years, male, white, stage:iiic, dead, 296 days
3202.2
TCGA-VQ-A924-01A
69 years, male, stage:ii, dead, 1686 days
3156.5
TCGA-BR-8059-01A
72 years, male, white, stage:iii, dead, 439 days
3156.3
TCGA-BR-A4J7-01A
49 years, male, asian, stage:iib, alive, 989 days
3147.6
TCGA-BR-6566-01A
64 years, female, white, stage:iia, alive, 997 days
3139.7
TCGA-BR-7707-01A
69 years, female, white, stage:ib, alive, 1090 days
3078.0
TCGA-FP-8631-01A
68 years, male, white, stage:iiia, alive, 17 days
3077.5
TCGA-BR-8384-01A
69 years, male, white, stage:iiic, alive, 113 days
3032.2
TCGA-BR-7958-01A
60 years, male, white, stage:iiib, alive, 899 days
2983.4
TCGA-RD-A8NB-01A
80 years, female, white, stage:iiia, dead, 513 days
2970.7
TCGA-BR-6456-01A
74 years, female, white, stage:iib, dead, 526 days
2918.5
TCGA-BR-6564-01A
46 years, female, white, stage:iiia, dead, 794 days
2867.0
TCGA-BR-8365-01A
70 years, female, white, stage:iia, dead, 533 days
2866.3
TCGA-FP-8210-01A
48 years, male, asian, stage:iiia, dead, 153 days
2863.7
TCGA-BR-8592-01A
63 years, female, white, stage:iiib, dead, 191 days
2846.0
TCGA-VQ-AA6G-01A
68 years, male, white, stage:iia, dead, 792 days
2844.5
TCGA-FP-A4BF-01A
68 years, male, white, stage:iiia, dead, 168 days
2836.6
TCGA-HU-A4H4-01A
53 years, female, asian, stage:iib, alive, 725 days
2836.0
TCGA-BR-7851-01A
74 years, male, white, stage:iib, dead, 574 days
2814.0
TCGA-CD-5799-01A
45 years, male, asian, stage:ii, alive, 396 days
2808.9
TCGA-FP-A8CX-01A
60 years, male, white, stage:iiic, alive, 7 days
2808.0
TCGA-VQ-A8PJ-01A
53 years, male, stage:iv, dead, 82 days
2798.3
TCGA-VQ-A91K-01A
69 years, male, white, stage:iiia, alive, 1862 days
2798.1
TCGA-BR-7717-01A
63 years, male, white, stage:iv, dead, 552 days
2726.4
TCGA-VQ-A91D-01A
70 years, male, white, stage:iiic, dead, 356 days
2711.9
TCGA-D7-8578-01A
72 years, male, white, stage:ib, alive, 643 days
2705.2
TCGA-BR-7704-01A
69 years, female, white, stage:ii, alive, 1072 days
2694.9
TCGA-BR-8081-01A
71 years, female, white, stage:iib, alive, 981 days
2689.0
TCGA-HJ-7597-01A
71 years, female, white, stage:ib, dead, 805 days
2685.6
TCGA-R5-A7ZE-01B
66 years, female, white, stage:iiia, dead, 554 days
2685.0
TCGA-HU-A4GJ-01A
60 years, female, asian, stage:iiic, alive, 650 days
2676.1
TCGA-BR-8690-01A
54 years, female, white, stage:iiib, alive, 325 days
2666.9
TCGA-B7-A5TN-01A
60 years, male, white, stage:iib, alive, 287 days
2656.2
TCGA-BR-8486-01A
90 years, female, white, stage:ia, alive, 615 days
2649.4
TCGA-FP-7829-01A
69 years, male, white, stage:iib, alive, 594 days
2647.5
TCGA-D7-A74A-01A
61 years, female, white, stage:iiia, alive, 607 days
2646.6
TCGA-RD-A7C1-01A
82 years, male, white, stage:ib, dead, 507 days
2646.3
TCGA-VQ-A925-01A
66 years, male, white, stage:iiia, dead, 138 days
2633.2
TCGA-VQ-AA64-01A
68 years, male, white, stage:iiib, dead, 560 days
2631.0
TCGA-CG-4437-01A
83 years, male, stage:ii, alive, 245 days
2628.7
TCGA-IN-A7NT-01A
73 years, female, white, stage:iib, alive, 323 days
2609.7
TCGA-BR-8284-01A
72 years, female, white, stage:iiic, dead, 245 days
2605.7
TCGA-VQ-A8PF-01A
77 years, male, stage:iiib, dead, 76 days
2601.5
TCGA-CD-8525-01A
82 years, female, asian, stage:iiia, alive, 383 days
2589.2
TCGA-D7-A4YX-01A
63 years, male, white, stage:iib, alive, 1108 days
2584.9
TCGA-VQ-A8PK-01A
58 years, male, white, stage:iiib, dead, 543 days
2574.7
TCGA-MX-A5UJ-01A
86 years, female, white, stage:iiia, alive, 600 days
2545.1
TCGA-CD-5801-01A
male, asian, stage:iiia, dead, 401 days
2538.0
TCGA-VQ-A923-01A
90 years, male, white, stage:iiia, dead, 61 days
2532.9
TCGA-D7-6524-01A
53 years, male, white, stage:ii, alive, 543 days
2515.3
TCGA-CG-5734-01A
68 years, male, stage:iiia, dead, 243 days
2513.9
TCGA-D7-8576-01A
54 years, female, white, stage:iiib, dead, 446 days
2511.8
TCGA-CD-8530-01A
52 years, male, asian, stage:ii, alive, 377 days
2498.0
TCGA-CG-5726-01A
73 years, male, stage:ia, dead, 881 days
2496.4
TCGA-MX-A663-01A
66 years, male, white, stage:iia, dead, 300 days
2493.6
TCGA-CD-8528-01A
43 years, female, asian, stage:iiia, alive, 375 days
2493.5
TCGA-RD-A7BS-01A
46 years, male, white, stage:iiia, dead, 336 days
2491.3
TCGA-BR-8364-01A
42 years, female, white, stage:iiic, alive, 675 days
2483.7
TCGA-BR-8368-01A
84 years, female, white, stage:ib, alive, 131 days
2482.7
TCGA-BR-A4J8-01A
71 years, female, white, stage:iiib, alive, 411 days
2471.9
TCGA-BR-8382-01A
67 years, female, white, stage:iiic, dead, 762 days
2462.8
TCGA-EQ-8122-01A
72 years, female, white, stage:iib, dead, 243 days
2462.5
TCGA-HU-A4H2-01A
58 years, female, asian, stage:iiib, alive, 394 days
2461.7
TCGA-D7-5577-01A
53 years, female, white, stage:iiia, dead, 782 days
2454.9
TCGA-KB-A93J-01A
78 years, male, white, stage:ii, alive, 1124 days
2446.6
TCGA-BR-8680-01A
45 years, male, asian, stage:iv, alive, 972 days
2445.1
TCGA-VQ-A91A-01A
67 years, male, white, stage:iiib, alive, 1200 days
2434.2
TCGA-BR-8080-01A
72 years, female, white, stage:iiic, dead, 292 days
2433.4
TCGA-FP-7916-01A
78 years, male, asian, stage:iiic, dead, 428 days
2416.3
TCGA-CG-5723-01A
83 years, male, stage:ii, alive, 3196 days
2413.2
TCGA-CD-8532-01A
52 years, male, asian, stage:ii, dead, 354 days
2408.3
TCGA-VQ-A8DZ-01A
70 years, male, black or african american, stage:iv, dead, 396 days
2406.3
TCGA-F1-A72C-01A
68 years, male, asian, stage:iia, alive, 346 days
2402.7
TCGA-BR-8381-01A
51 years, male, white, stage:iib, alive, 224 days
2402.3
TCGA-BR-6705-01A
68 years, female, white, stage:iiib, dead, 779 days
2396.1
TCGA-BR-8286-01A
49 years, male, white, stage:ii, alive, 895 days
2389.2
TCGA-ZA-A8F6-01A
71 years, male, white, stage:ib, alive, 525 days
2387.2
TCGA-KB-A6F7-01A
54 years, female, stage:ib, alive, 1935 days
2386.6
TCGA-CG-4440-01A
68 years, female, stage:iv, dead, 122 days
2368.4
TCGA-BR-A4CS-01A
77 years, male, white, stage:iiic, dead, 45 days
2362.5
TCGA-VQ-A91E-01A
67 years, female, white, stage:iiib, alive, 664 days
2360.8
TCGA-VQ-A8PP-01A
76 years, male, stage:iv, dead, 712 days
2345.7
TCGA-D7-A748-01A
41 years, female, white, stage:iv, dead, 132 days
2343.4
TCGA-HU-A4GT-01A
71 years, female, asian, stage:iia, alive, 198 days
2339.4
TCGA-D7-8572-01A
57 years, male, white, stage:iib, alive, 511 days
2337.8
TCGA-VQ-A91N-01A
59 years, female, stage:iv, dead, 570 days
2328.2
TCGA-IN-7808-01A
59 years, male, white, dead, 105 days
2323.5
TCGA-BR-7957-01A
50 years, female, white, stage:iv, dead, 276 days
2321.0
TCGA-VQ-A8PC-01A
65 years, male, white, stage:iiia, dead, 1407 days
2316.7
TCGA-VQ-A8E3-01A
79 years, male, white, stage:iia, dead, 661 days
2310.8
TCGA-R5-A7ZI-01A
44 years, female, white, stage:iv, alive, 2267 days
2309.2
TCGA-D7-6526-01A
67 years, female, white, stage:iiia, alive, 523 days
2302.6
TCGA-HU-A4HB-01A
68 years, male, asian, stage:iib, dead, 477 days
2302.4
TCGA-HU-A4GC-01A
74 years, male, asian, stage:iiib, alive, 99 days
2299.5
TCGA-IN-A6RL-01A
84 years, male, white, dead, 406 days
2296.8
TCGA-BR-7901-01A
74 years, male, white, stage:iib, dead, 105 days
2292.9
TCGA-BR-6801-01A
70 years, male, white, stage:iia, alive, 1223 days
2291.2
TCGA-SW-A7EB-01A
45 years, male, white, stage:iiia, alive, 176 days
2285.9
TCGA-BR-6803-01A
54 years, female, white, stage:iia, alive, 949 days
2283.1
TCGA-CD-A4MG-01A
76 years, male, asian, stage:iia, dead, 200 days
2283.0
TCGA-CD-A487-01A
51 years, male, asian, stage:iib, alive, 374 days
2279.8
TCGA-BR-6457-01A
69 years, male, white, stage:iia, alive, 416 days
2279.1
TCGA-D7-8579-01A
66 years, female, white, stage:iib, alive, 636 days
2278.5
TCGA-VQ-A8PD-01A
69 years, male, white, stage:iiic, dead, 496 days
2271.8
TCGA-VQ-A8P8-01A
72 years, female, black or african american, stage:iib, alive, 942 days
2268.9
TCGA-BR-8487-01A
64 years, female, white, stage:iia, alive, 34 days
2267.0
TCGA-D7-6522-01A
58 years, male, white, stage:ib, alive, 566 days
2244.7
TCGA-RD-A8N5-01A
78 years, male, white, stage:iiia, dead, 1747 days
2232.6
TCGA-R5-A7O7-01A
52 years, male, white, stage:iv, alive, 1389 days
2232.4
TCGA-RD-A8MV-01A
56 years, male, white, stage:iiib, alive, 3720 days
2227.9
TCGA-D7-8570-01A
44 years, male, white, stage:iiib, alive, 752 days
2221.1
TCGA-VQ-A8PQ-01A
50 years, female, white, stage:iv, dead, 476 days
2215.2
TCGA-BR-6458-01A
57 years, female, white, stage:iib, dead, 588 days
2213.8
TCGA-VQ-A8P5-01A
67 years, male, white, stage:iia, dead, 235 days
2213.5
TCGA-BR-8588-01A
55 years, female, white, stage:iib, alive, 389 days
2208.1
TCGA-IN-A7NU-01A
69 years, male, white, stage:iiib, alive, 356 days
2205.6
TCGA-BR-8372-01A
63 years, male, white, stage:iiic, alive, 951 days
2200.4
TCGA-VQ-AA6F-01A
58 years, male, white, stage:iib, alive, 1646 days
2195.1
TCGA-BR-6852-01A
64 years, female, white, stage:iia, alive, 1367 days
2189.7
TCGA-IN-A6RR-01A
84 years, male, white, dead, 205 days
2188.2
TCGA-D7-A6EY-01A
72 years, female, white, stage:iiib, dead, 348 days
2181.4
TCGA-BR-7722-01A
62 years, male, white, stage:iib, dead, 466 days
2180.3
TCGA-BR-8677-01A
74 years, female, white, stage:iiib, alive, 813 days
2178.2
TCGA-D7-A4YU-01A
73 years, male, white, stage:iiib, alive, 500 days
2176.3
TCGA-HU-8238-01A
56 years, male, asian, alive, 46 days
2175.5
TCGA-VQ-A94O-01A
74 years, male, black or african american, stage:iiic, dead, 640 days
2160.9
TCGA-BR-6452-01A
78 years, female, white, stage:iia, alive, 1055 days
2160.8
TCGA-HF-A5NB-01A
75 years, female, stage:iiic, alive, 928 days
2158.1
TCGA-BR-A4J4-01A
39 years, male, asian, stage:iiib, alive, 16 days
2143.5
TCGA-VQ-A94T-01A
73 years, male, stage:iiib, dead, 342 days
2135.2
TCGA-VQ-AA6K-01A
60 years, male, white, stage:iiic, dead, 378 days
2132.5
TCGA-BR-7959-01A
59 years, male, white, stage:iiia, alive, 1010 days
2131.4
TCGA-D7-8573-01A
57 years, male, white, stage:iia, alive, 593 days
2128.7
TCGA-HU-8604-01A
82 years, female, asian, stage:iia, alive, 694 days
2123.4
TCGA-B7-A5TI-01A
52 years, male, white, stage:iiic, alive, 595 days
2119.7
TCGA-BR-8289-01A
57 years, male, white, stage:iv, dead, 81 days
2119.6
TCGA-CD-8529-01A
65 years, male, asian, stage:iv, alive, 374 days
2119.0
TCGA-R5-A7ZR-01A
70 years, female, black or african american, stage:iii, dead, 185 days
2114.3
TCGA-RD-A7BT-01A
66 years, male, native hawaiian or other pacific islander, stage:iv, dead, 262 days
2111.4
TCGA-RD-A8N6-01A
78 years, female, white, stage:iiia, dead, 272 days
2107.8
TCGA-CG-4305-01A
69 years, male, stage:ii, alive, 485 days
2099.8
TCGA-BR-7716-01A
62 years, female, white, stage:iib, alive, 1210 days
2095.9
TCGA-BR-8483-01A
59 years, male, white, stage:iiia, alive, 164 days
2093.1
TCGA-IN-8663-01A
68 years, male, white, stage:iib, dead, 103 days
2092.7
TCGA-FP-A9TM-01A
77 years, male, white, alive, 189 days
2084.9
TCGA-FP-7735-01A
77 years, male, black or african american, stage:ib, dead, 106 days
2080.5
TCGA-BR-6565-01A
67 years, male, white, stage:iib, dead, 279 days
2079.9
TCGA-BR-8058-01A
53 years, female, white, stage:iiib, alive, 1133 days
2079.3
TCGA-IN-A6RI-01A
45 years, male, white, stage:i, alive, 559 days
2078.4
TCGA-D7-A4Z0-01A
60 years, female, white, stage:iib, alive, 449 days
2070.0
TCGA-CG-5721-01A
58 years, male, stage:iv, alive, 183 days
2066.9
TCGA-D7-6525-01A
58 years, male, white, stage:iiia, dead, 406 days
2066.5
TCGA-D7-A6EV-01A
71 years, female, white, stage:iib, alive, 342 days
2059.1
TCGA-BR-8296-01A
58 years, female, white, stage:iiic, dead, 474 days
2058.4
TCGA-HU-A4G8-01A
71 years, female, asian, stage:iib, alive, 690 days
2046.6
TCGA-FP-8211-01A
62 years, male, white, stage:iib, alive, 413 days
2044.6
TCGA-HU-8608-01A
70 years, male, asian, stage:iiib, alive, 641 days
2044.6
TCGA-BR-4256-01A
80 years, male, white, dead, 284 days
2042.1
TCGA-RD-A8MW-01A
72 years, male, white, stage:iiib, dead, 1153 days
2039.6
TCGA-BR-7196-01A
64 years, male, white, stage:iv, alive, 666 days
2037.9
TCGA-BR-8369-01A
76 years, female, white, stage:iiib, alive, 427 days
2033.2
TCGA-CG-4465-01A
69 years, female, stage:iv, dead, 274 days
2020.1
TCGA-IN-A7NR-01A
64 years, female, white, stage:iv, alive, 198 days
2020.1
TCGA-VQ-AA6J-01A
75 years, male, black or african american, stage:iiib, alive, 838 days
2018.4
TCGA-VQ-AA69-01A
35 years, male, white, stage:iiia, alive, 864 days
2016.2
TCGA-FP-7998-01A
77 years, male, white, stage:iiic, alive, 678 days
2014.5
TCGA-BR-6709-01A
57 years, female, white, stage:iiib, dead, 370 days
2011.4
TCGA-HU-8249-01A
76 years, male, asian, stage:iiia, alive, 881 days
2008.6
TCGA-VQ-A8DT-01A
43 years, male, stage:iiib, alive, 1484 days
2008.5
TCGA-F1-6177-01A
90 years, male, black or african american, stage:i, dead, 200 days
2007.3
TCGA-KB-A93H-01A
79 years, female, asian, stage:iib, alive, 1145 days
1998.9
TCGA-CG-5719-01A
54 years, female, stage:iv, alive, 31 days
1997.6
TCGA-D7-6521-01A
65 years, male, white, alive, 564 days
1994.2
TCGA-BR-A4QL-01A
75 years, female, white, stage:iiib, dead, 491 days
1988.8
TCGA-BR-4257-01A
79 years, female, white, dead, 294 days
1987.0
TCGA-BR-8591-01A
79 years, male, white, stage:iiic, alive, 856 days
1985.1
TCGA-VQ-A91U-01A
78 years, male, asian, stage:iiia, dead, 52 days
1983.6
TCGA-VQ-A8PE-01A
78 years, male, white, stage:iiib, dead, 675 days
1981.0
TCGA-D7-6818-01A
53 years, male, white, stage:iiia, dead, 376 days
1977.0
TCGA-HU-A4GX-01A
70 years, female, asian, stage:iiic, alive, 616 days
1975.7
TCGA-B7-A5TJ-01A
74 years, male, white, stage:iib, alive, 335 days
1973.6
TCGA-CD-A486-01A
68 years, male, asian, stage:iia, dead, 192 days
1958.7
TCGA-B7-5818-01A
62 years, male, white, stage:ib, alive, 356 days
1958.6
TCGA-RD-A8N1-01A
70 years, male, white, stage:iiib, alive, 3519 days
1955.7
TCGA-F1-6874-01A
79 years, male, white, stage:ib, alive, 440 days
1953.9
TCGA-HU-A4H6-01A
72 years, female, asian, stage:iiia, alive, 644 days
1937.6
TCGA-D7-5578-01A
80 years, male, white, stage:iiia, alive, 385 days
1937.3
TCGA-CD-8527-01A
72 years, female, asian, stage:ii, dead, 218 days
1932.8
TCGA-CD-5803-01A
78 years, female, asian, stage:ii, dead, 341 days
1929.2
TCGA-CG-5722-01A
67 years, female, stage:iv, alive, 30 days
1927.6
TCGA-KB-A93G-01A
68 years, male, white, stage:ib, alive, 613 days
1925.4
TCGA-VQ-A8PH-01A
62 years, male, white, stage:iiib, dead, 389 days
1921.3
TCGA-BR-8676-01A
59 years, male, white, stage:iiib, alive, 229 days
1911.8
TCGA-VQ-A927-01A
81 years, male, white, stage:iiib, dead, 200 days
1910.3
TCGA-IN-AB1X-01A
78 years, female, white, stage:iia, alive, 411 days
1900.9
TCGA-BR-8484-01A
61 years, male, white, stage:iiia, dead, 766 days
1889.0
TCGA-D7-A6EZ-01A
66 years, male, white, stage:iiia, dead, 618 days
1888.3
TCGA-BR-8485-01A
68 years, female, white, stage:iiic, alive, 280 days
1884.7
TCGA-D7-A6F0-01A
79 years, female, white, stage:ib, alive, 678 days
1881.6
TCGA-BR-8590-01A
62 years, male, white, stage:iiic, dead, 284 days
1866.3
TCGA-BR-4253-01A
80 years, female, white, stage:iiia, dead, 124 days
1858.5
TCGA-VQ-A8E7-01B
59 years, male, white, stage:iv, alive, 1138 days
1847.5
TCGA-BR-8367-01A
56 years, male, white, stage:iiib, dead, 801 days
1845.1
TCGA-HU-A4GF-01A
69 years, male, asian, stage:iia, alive, 785 days
1831.0
TCGA-VQ-A91X-01A
74 years, male, white, stage:iiib, dead, 289 days
1828.5
TCGA-CG-5720-01A
71 years, male, stage:ib, dead, 30 days
1818.9
TCGA-BR-8687-01A
67 years, female, white, stage:iiic, dead, 250 days
1818.4
TCGA-HU-A4G2-01A
46 years, male, asian, stage:iib, alive, 739 days
1817.0
TCGA-HU-8610-01A
75 years, male, asian, stage:ia, alive, 23 days
1807.8
TCGA-D7-8575-01A
75 years, male, white, stage:iiia, dead, 554 days
1804.1
TCGA-FP-8099-01A
79 years, male, white, stage:iia, alive, 519 days
1794.7
TCGA-HU-A4GY-01A
77 years, female, asian, stage:iiia, alive, 8 days
1789.0
TCGA-R5-A7ZF-01A
65 years, female, black or african american, stage:iv, dead, 259 days
1787.5
TCGA-MX-A5UG-01A
78 years, male, asian, stage:iiia, dead, 113 days
1783.1
TCGA-CD-A4MH-01A
86 years, female, asian, stage:iia, alive, 371 days
1776.0
TCGA-D7-8574-01A
72 years, male, white, stage:iiia, alive, 523 days
1775.3
TCGA-D7-6519-01A
64 years, female, white, alive, 625 days
1768.3
TCGA-D7-6528-01A
70 years, female, white, stage:ib, alive, 463 days
1766.7
TCGA-CD-5800-01A
female, asian, stage:ii, alive, 400 days
1765.2
TCGA-VQ-A94U-01A
71 years, male, white, stage:iib, alive, 819 days
1764.4
TCGA-F1-A448-01A
70 years, male, white, stage:iiib, alive, 647 days
1759.9
TCGA-IN-A6RS-01A
76 years, male, white, stage:ia, alive, 383 days
1757.2
TCGA-CD-8526-01A
73 years, female, asian, stage:iiia, alive, 381 days
1753.8
TCGA-VQ-A8PM-01A
56 years, male, white, stage:iv, dead, 57 days
1746.4
TCGA-BR-8686-01A
69 years, male, asian, stage:iiib, dead, 635 days
1739.5
TCGA-CG-5717-01A
58 years, male, stage:ii, dead, 212 days
1730.4
TCGA-BR-8295-01A
60 years, female, white, stage:iib, dead, 67 days
1720.4
TCGA-BR-4201-01A
66 years, female, white, dead, 940 days
1718.4
TCGA-HU-A4H0-01A
72 years, male, asian, stage:iiic, alive, 64 days
1713.6
TCGA-CG-4438-01A
56 years, male, stage:iv, alive, 1645 days
1696.1
TCGA-BR-6453-01A
54 years, male, white, stage:iia, alive, 485 days
1688.3
TCGA-CD-8534-01A
41 years, male, asian, stage:ii, alive, 367 days
1684.9
TCGA-BR-8683-01A
75 years, male, asian, stage:iiib, dead, 300 days
1679.0
TCGA-VQ-A8PU-01A
72 years, female, white, stage:iiia, dead, 832 days
1673.9
TCGA-VQ-A8PX-01A
51 years, male, stage:ia, alive, 1964 days
1673.1
TCGA-HU-A4GH-01A
75 years, male, asian, stage:ia, alive, 358 days
1669.6
TCGA-CD-A48A-01A
57 years, male, asian, stage:iia, alive, 378 days
1666.9
TCGA-BR-8589-01A
56 years, male, white, stage:iiib, alive, 825 days
1663.6
TCGA-HU-A4HD-01A
73 years, male, asian, stage:iiia, alive, 1016 days
1655.6
TCGA-VQ-A8DV-01A
48 years, male, white, stage:ib, dead, 403 days
1633.6
TCGA-VQ-A94R-01A
63 years, male, white, dead, 1294 days
1627.7
TCGA-CG-5725-01A
72 years, male, stage:ib, dead, 457 days
1614.9
TCGA-BR-8077-01A
58 years, female, white, stage:iiib, alive, 21 days
1610.4
TCGA-BR-A4J6-01A
69 years, female, white, stage:iia, alive, 20 days
1608.4
TCGA-RD-A8N0-01A
53 years, female, white, stage:iiib, alive, 1236 days
1599.3
TCGA-BR-8291-01A
61 years, male, white, stage:iib, dead, 607 days
1593.9
TCGA-BR-8361-01A
71 years, female, white, stage:iiic, alive, 946 days
1589.5
TCGA-D7-6520-01A
53 years, male, white, stage:iiia, alive, 573 days
1583.8
TCGA-BR-A44U-01A
70 years, male, white, stage:iiib, dead, 422 days
1580.5
TCGA-HF-7134-01A
male, stage:ia, alive, 1588 days
1580.2
TCGA-VQ-A8P2-01A
68 years, male, white, stage:iiia, alive, 1160 days
1580.2
TCGA-BR-6707-01A
75 years, male, white, stage:iia, alive, 605 days
1570.3
TCGA-BR-6563-01A
60 years, male, white, stage:iib, alive, 679 days
1558.5
TCGA-HU-A4GD-01A
56 years, male, asian, stage:iib, alive, 692 days
1557.1
TCGA-3M-AB46-01A
male, white, stage:ib, alive, 1765 days
1554.1
TCGA-D7-6815-01A
70 years, female, white, stage:iib, alive, 486 days
1546.1
TCGA-RD-A8N9-01A
63 years, female, asian, stage:ii, alive, 1083 days
1533.9
TCGA-IN-A6RJ-01A
64 years, male, white, stage:ia, alive, 379 days
1531.8
TCGA-D7-A6EX-01A
72 years, female, white, stage:iiia, alive, 86 days
1526.6
TCGA-HF-7132-01A
male, stage:ii, alive, 2351 days
1526.0
TCGA-CG-5718-01A
78 years, female, stage:ii, dead, 1095 days
1516.9
TCGA-BR-6455-01A
59 years, male, white, stage:iib, dead, 422 days
1506.1
TCGA-VQ-A91S-01A
63 years, male, black or african american, stage:iiib, alive, 1000 days
1501.6
TCGA-BR-8682-01A
52 years, male, asian, stage:iib, alive, 991 days
1496.7
TCGA-VQ-A8P3-01A
72 years, male, white, stage:iiia, alive, 1132 days
1487.6
TCGA-VQ-A922-01A
70 years, male, stage:iv, dead, 275 days
1485.2
TCGA-CG-4306-01A
90 years, male, stage:iv, dead, 31 days
1469.7
TCGA-CG-4441-01A
83 years, male, stage:iiia, dead, 426 days
1467.1
TCGA-R5-A805-01A
71 years, male, white, stage:iiib, dead, 281 days
1460.6
TCGA-IP-7968-01A
74 years, male, white, stage:iiib, alive, 77 days
1457.8
TCGA-CD-8535-01A
59 years, male, asian, stage:iiia, alive, 390 days
1455.9
TCGA-CD-5813-01A
60 years, male, asian, stage:ii, dead, 377 days
1450.2
TCGA-BR-7197-01A
69 years, male, white, stage:ii, alive, 280 days
1437.5
TCGA-CG-4301-01A
75 years, female, stage:iv, alive, 92 days
1429.0
TCGA-BR-8060-01A
75 years, female, white, stage:iib, dead, 348 days
1412.0
TCGA-BR-7715-01A
65 years, male, white, stage:iia, alive, 1023 days
1408.5
TCGA-VQ-A8E2-01A
57 years, male, asian, stage:iiib, alive, 1319 days
1374.3
TCGA-CG-4469-01A
70 years, male, stage:iv, dead, 215 days
1365.2
TCGA-VQ-A91V-01A
58 years, male, stage:iiia, alive, 1297 days
1351.0
TCGA-CG-4436-01A
57 years, male, stage:ib, alive, 243 days
1350.5
TCGA-VQ-A8E0-01A
68 years, male, black or african american, stage:iiia, dead, 562 days
1346.7
TCGA-BR-4191-01A
72 years, male, white, dead, 558 days
1341.0
TCGA-BR-A4PF-01A
72 years, male, white, stage:iiib, alive, 35 days
1340.8
TCGA-BR-8373-01A
65 years, female, white, stage:iiia, alive, 450 days
1328.9
TCGA-HF-7133-01A
female, stage:iv, alive, 1918 days
1328.3
TCGA-HU-A4G9-01A
67 years, female, asian, stage:ia, alive, 736 days
1307.3
TCGA-VQ-A928-01A
49 years, male, white, stage:iv, dead, 174 days
1297.7
TCGA-MX-A666-01A
61 years, male, white, stage:iia, alive, 427 days
1290.9
TCGA-BR-8678-01A
76 years, male, white, stage:ib, alive, 754 days
1290.3
TCGA-HU-A4G3-01A
54 years, male, asian, stage:iib, alive, 170 days
1287.9
TCGA-HU-A4H8-01A
77 years, male, asian, stage:ib, alive, 428 days
1286.6
TCGA-VQ-AA6D-01A
52 years, female, stage:iiia, alive, 521 days
1285.1
TCGA-HU-8244-01A
77 years, female, asian, stage:ia, alive, 742 days
1276.5
TCGA-BR-4187-01A
56 years, male, white, dead, 141 days
1275.3
TCGA-BR-4280-01A
78 years, female, white, stage:iii, dead, 201 days
1272.4
TCGA-HU-A4GU-01A
74 years, male, asian, stage:iib, alive, 200 days
1270.6
TCGA-CG-4477-01A
58 years, female, stage:ib, alive, 942 days
1249.1
TCGA-D7-A6F2-01A
62 years, male, white, stage:ib, alive, 476 days
1214.6
TCGA-HU-A4H5-01A
71 years, male, asian, stage:ib, alive, 724 days
1195.5
TCGA-VQ-A8DU-01A
63 years, male, white, stage:iiia, dead, 166 days
1184.2
TCGA-IN-AB1V-01A
63 years, male, white, stage:ia, alive, 479 days
1148.8
TCGA-CG-4444-01A
76 years, male, stage:iiia, alive, 1431 days
1135.2
TCGA-VQ-A91Q-01A
61 years, male, stage:iv, dead, 633 days
1134.2
TCGA-D7-6822-01A
77 years, male, white, stage:ib, alive, 375 days
1129.4
TCGA-CG-4475-01A
76 years, male, stage:iib, alive, 699 days
1116.1
TCGA-BR-4279-01A
44 years, male, white, stage:ii, dead, 291 days
1084.2
TCGA-BR-7723-01A
59 years, male, white, stage:iiib, dead, 874 days
1072.7
TCGA-CD-8533-01A
48 years, male, asian, stage:ii, alive, 468 days
1064.6
TCGA-D7-6527-01A
62 years, male, white, stage:ii, dead, 312 days
1060.4
TCGA-F1-6875-01A
80 years, male, black or african american, stage:ia, dead, 2197 days
896.4
TCGA-IN-7806-01A
50 years, male, white, stage:iib, alive, 1106 days
882.9
TCGA-CG-4460-01A
66 years, female, stage:iv, dead, 669 days
848.7
TCGA-CG-5732-01A
66 years, male, stage:iv, dead, 2100 days
829.1
TCGA-BR-6710-01A
41 years, male, white, stage:ib, alive, 273 days
799.7
TCGA-CG-4466-01A
81 years, female, stage:ib, alive, 577 days
772.1
TCGA-BR-4267-01A
51 years, male, white, stage:ib, dead, 188 days
736.1
TCGA-IN-A6RN-01A
72 years, female, white, stage:iia, alive, 594 days
726.9
TCGA-VQ-A91Z-01A
67 years, female, white, stage:iiia, alive, 1690 days
584.1
TCGA-CG-4443-01A
68 years, male, stage:ia, alive, 912 days
468.8
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STOMACH CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.