The Single Cell Type Atlas

Explore the proteomes of the single cell types in the pages below. Each page is dedicated to a cell type group and each group includes cell types with functional features in common. Symbols and names are clickable and will redirect to the corresponding page. If you hover the mouse-pointer over a certain symbol or name, the corresponding location in the human body will be highlighted in the human figures.

The tree-like cell type dendrogram below shows the relationship between all single cell types based on genome-wide expression. The color-coding corresponds to the cell type groups presented above. Each cell type is clickable and will redirect to the corresponding section of the cell type proteomes. If you hover the mouse-pointer over a certain symbol or name, the corresponding location in the human body will be highlighted in the human figures.
The cell type dendrogram is based on agglomerative clustering of 1 - Spearman's rho between cell types using Ward's criterion. The dendrogram was then transformed into a hierarchical graph, thus where link distances were normalized to emphasize graph connections rather than link distances. Link width is proportional to the distance from the root, and are colored according to cell type group if only one cell type group is present among connected leaves.