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OVARIAN CANCER - Interactive survival scatter ploti
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
: Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A 5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A 5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as median FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average FPKM
385.6
Number of samples
373
Samples
Sample
Description
FPKM
TCGA-59-2348-01A
female, white, alive, 5481 days
1162.8
TCGA-24-1423-01A
61 years, female, white, alive, 190 days
1126.9
TCGA-25-2392-01A
75 years, female, white, dead, 31 days
966.3
TCGA-09-2045-01A
50 years, female, asian, dead, 1069 days
833.8
TCGA-24-1847-01A
45 years, female, white, alive, 343 days
799.7
TCGA-31-1956-01A
60 years, female, white, alive, 1342 days
790.8
TCGA-23-2077-01A
45 years, female, white, alive, 3525 days
782.3
TCGA-29-1710-01A
54 years, female, white, dead, 951 days
779.9
TCGA-31-1953-01A
52 years, female, asian, alive, 204 days
772.3
TCGA-30-1860-01A
58 years, female, white, dead, 1366 days
763.2
TCGA-25-1630-01A
73 years, female, white, dead, 1162 days
731.9
TCGA-25-1326-01A
61 years, female, white, dead, 1249 days
722.4
TCGA-61-2003-01A
53 years, female, white, alive, 122 days
721.7
TCGA-25-2404-01A
38 years, female, american indian or alaska native, dead, 883 days
717.8
TCGA-61-2111-01A
61 years, female, white, alive, 3825 days
708.3
TCGA-29-1711-01A
45 years, female, black or african american, alive, 1053 days
694.2
TCGA-29-2427-01A
60 years, female, white, alive, 1900 days
693.3
TCGA-25-1631-01A
73 years, female, white, dead, 9 days
689.4
TCGA-13-1411-01A
81 years, female, white, dead, 531 days
688.8
TCGA-24-2293-01A
47 years, female, white, dead, 506 days
685.7
TCGA-24-2290-01A
56 years, female, white, dead, 1102 days
676.3
TCGA-36-1576-01A
76 years, female, alive, 915 days
663.6
TCGA-24-2289-01A
69 years, female, white, dead, 2049 days
660.2
TCGA-25-1626-01A
65 years, female, white, dead, 518 days
650.3
TCGA-24-1930-01A
53 years, female, white, dead, 2467 days
640.5
TCGA-61-1733-01A
71 years, female, white, alive, 967 days
631.9
TCGA-61-1721-01A
38 years, female, white, alive, 338 days
622.8
TCGA-36-1568-01A
52 years, female, alive, 875 days
618.2
TCGA-13-0923-01A
74 years, female, white, alive, 2547 days
617.1
TCGA-57-1994-01A
63 years, female, white, alive, 761 days
616.2
TCGA-24-1842-01A
49 years, female, white, alive, 253 days
613.3
TCGA-25-1870-01A
59 years, female, white, dead, 455 days
604.3
TCGA-31-1946-01A
30 years, female, alive, 918 days
601.2
TCGA-13-0730-01A
71 years, female, white, dead, 542 days
598.7
TCGA-09-2044-01B
77 years, female, asian, alive, 186 days
598.5
TCGA-29-1781-01A
69 years, female, white, alive, 255 days
593.2
TCGA-61-1995-01A
43 years, female, white, alive, 61 days
588.1
TCGA-29-1695-01A
62 years, female, white, dead, 1229 days
588.0
TCGA-24-1560-01A
51 years, female, white, dead, 1341 days
586.6
TCGA-61-2109-01A
40 years, female, white, dead, 629 days
583.2
TCGA-61-1738-01A
60 years, female, black or african american, dead, 1089 days
582.4
TCGA-09-0366-01A
56 years, female, white, dead, 1757 days
581.0
TCGA-25-1633-01A
64 years, female, white, dead, 1891 days
580.7
TCGA-25-1321-01A
65 years, female, white, dead, 1033 days
579.2
TCGA-24-1417-01A
54 years, female, white, alive, 238 days
576.2
TCGA-25-2401-01A
64 years, female, white, dead, 90 days
574.4
TCGA-36-1569-01A
52 years, female, white, alive, 885 days
572.6
TCGA-24-1553-01A
53 years, female, white, dead, 1767 days
572.2
TCGA-61-2012-01A
81 years, female, white, alive, 932 days
567.1
TCGA-24-1428-01A
50 years, female, white, alive, 529 days
565.5
TCGA-25-1623-01A
71 years, female, white, dead, 565 days
565.3
TCGA-36-1574-01A
48 years, female, asian, alive, 686 days
564.5
TCGA-24-1567-01A
54 years, female, white, dead, 524 days
564.1
TCGA-29-2425-01A
60 years, female, white, alive, 1977 days
561.2
TCGA-29-1784-01A
55 years, female, white, alive, 163 days
559.6
TCGA-59-2352-01A
female, white, dead, 286 days
559.4
TCGA-24-1843-01A
67 years, female, white, alive, 106 days
557.2
TCGA-61-1919-01A
58 years, female, white, dead, 1161 days
553.5
TCGA-23-1026-01B
45 years, female, white, alive, 816 days
543.3
TCGA-25-1322-01A
62 years, female, white, dead, 91 days
541.7
TCGA-31-1959-01A
49 years, female, white, alive, 67 days
537.3
TCGA-59-2350-01A
female, dead, 679 days
534.4
TCGA-23-1809-01A
63 years, female, white, alive, 16 days
534.2
TCGA-20-1682-01A
56 years, female, white, alive, 837 days
533.4
TCGA-25-2042-01A
60 years, female, american indian or alaska native, dead, 396 days
532.5
TCGA-61-1998-01A
48 years, female, white, alive, 168 days
529.7
TCGA-25-1628-01A
67 years, female, white, dead, 627 days
526.6
TCGA-36-1581-01A
63 years, female, white, alive, 751 days
526.2
TCGA-20-0987-01A
61 years, female, white, dead, 701 days
524.3
TCGA-61-2002-01A
46 years, female, white, alive, 547 days
518.4
TCGA-24-1434-01A
59 years, female, white, dead, 568 days
517.7
TCGA-25-2398-01A
71 years, female, white, dead, 1369 days
516.0
TCGA-57-1585-01A
57 years, female, white, dead, 53 days
515.6
TCGA-29-2428-01A
58 years, female, white, alive, 1372 days
513.2
TCGA-59-2351-01A
female, white, alive, 3532 days
512.2
TCGA-09-1662-01A
58 years, female, white, dead, 2717 days
511.5
TCGA-61-2008-01A
40 years, female, asian, alive, 932 days
511.1
TCGA-25-1318-01A
54 years, female, white, dead, 1064 days
510.2
TCGA-24-2261-01A
76 years, female, white, dead, 24 days
508.6
TCGA-24-1603-01A
53 years, female, white, dead, 2742 days
506.2
TCGA-29-1783-01A
58 years, female, white, alive, 220 days
504.6
TCGA-59-2354-01A
female, white, dead, 1046 days
499.4
TCGA-36-1580-01A
82 years, female, dead, 737 days
495.6
TCGA-13-1405-01A
49 years, female, white, dead, 868 days
495.5
TCGA-24-1427-01A
58 years, female, alive, 147 days
492.1
TCGA-57-1993-01A
56 years, female, white, alive, 763 days
489.9
TCGA-24-2020-01A
67 years, female, white, dead, 4624 days
488.2
TCGA-20-1683-01A
65 years, female, white, alive, 772 days
487.7
TCGA-23-1116-01A
83 years, female, white, dead, 592 days
484.1
TCGA-59-A5PD-01A
55 years, female, black or african american, dead, 624 days
483.6
TCGA-61-2104-01A
53 years, female, white, alive, 2338 days
483.6
TCGA-24-2035-01A
65 years, female, white, dead, 857 days
481.1
TCGA-61-1910-01A
56 years, female, white, alive, 1127 days
474.4
TCGA-24-1850-01A
72 years, female, white, alive, 168 days
474.0
TCGA-09-1673-01A
50 years, female, white, alive, 92 days
473.7
TCGA-29-1688-01A
39 years, female, white, dead, 2400 days
472.5
TCGA-24-1562-01A
67 years, female, white, dead, 1384 days
471.0
TCGA-61-2101-01A
55 years, female, white, dead, 1688 days
469.0
TCGA-09-1670-01A
57 years, female, white, alive, 547 days
468.7
TCGA-24-2297-01A
56 years, female, white, dead, 1699 days
468.7
TCGA-61-1914-01A
65 years, female, alive, 1722 days
468.1
TCGA-25-1627-01A
73 years, female, white, dead, 394 days
466.6
TCGA-61-1911-01A
55 years, female, white, alive, 1293 days
465.2
TCGA-24-1563-01A
66 years, female, black or african american, dead, 1451 days
464.6
TCGA-24-2267-01A
58 years, female, white, dead, 1446 days
464.4
TCGA-23-1123-01A
59 years, female, white, dead, 1018 days
464.2
TCGA-13-0924-01A
45 years, female, white, alive, 2614 days
463.3
TCGA-24-1924-01A
65 years, female, white, dead, 919 days
461.7
TCGA-24-0968-01A
59 years, female, white, dead, 598 days
460.7
TCGA-29-1705-01A
48 years, female, white, dead, 555 days
459.9
TCGA-24-1422-01A
82 years, female, black or african american, dead, 23 days
457.4
TCGA-57-1583-01A
57 years, female, black or african american, dead, 346 days
456.3
TCGA-61-2097-01A
71 years, female, white, alive, 1844 days
456.2
TCGA-23-2084-01A
45 years, female, white, dead, 1516 days
451.5
TCGA-61-1737-01A
42 years, female, white, alive, 1364 days
445.9
TCGA-25-1635-01A
71 years, female, white, dead, 1583 days
443.1
TCGA-13-1506-01A
45 years, female, white, dead, 1039 days
442.4
TCGA-61-1736-01B
45 years, female, white, dead, 1484 days
441.5
TCGA-61-1907-01A
63 years, female, white, alive, 952 days
440.4
TCGA-25-1320-01A
65 years, female, white, dead, 1155 days
440.3
TCGA-30-1718-01A
44 years, female, white, dead, 1579 days
436.9
TCGA-24-1846-01A
45 years, female, alive, 133 days
435.4
TCGA-24-1474-01A
57 years, female, black or african american, dead, 676 days
435.3
TCGA-09-2051-01A
42 years, female, white, alive, 1919 days
433.8
TCGA-23-1122-01A
53 years, female, white, dead, 1189 days
433.2
TCGA-24-1424-01A
67 years, female, white, alive, 183 days
431.7
TCGA-29-1763-01A
43 years, female, black or african american, alive, 2032 days
431.5
TCGA-61-1741-01A
76 years, female, white, dead, 1024 days
430.0
TCGA-24-1844-01A
64 years, female, white, alive, 113 days
428.7
TCGA-61-1900-01A
51 years, female, black or african american, alive, 176 days
427.7
TCGA-31-1944-01A
47 years, female, white, alive, 1386 days
426.9
TCGA-24-2023-01A
54 years, female, white, dead, 1364 days
426.6
TCGA-29-1701-01A
56 years, female, white, dead, 515 days
426.6
TCGA-29-1768-01A
50 years, female, white, dead, 952 days
425.0
TCGA-20-0991-01A
78 years, female, white, alive, 797 days
422.1
TCGA-13-0911-01A
55 years, female, white, dead, 1355 days
417.4
TCGA-13-0727-01A
71 years, female, white, dead, 462 days
416.8
TCGA-13-0766-01A
42 years, female, white, dead, 1725 days
415.2
TCGA-09-0369-01A
56 years, female, white, dead, 1082 days
413.7
TCGA-29-1697-01A
62 years, female, white, dead, 949 days
413.2
TCGA-61-1918-01A
45 years, female, white, dead, 479 days
412.8
TCGA-24-1435-01A
57 years, female, white, dead, 1324 days
412.3
TCGA-25-2391-01A
57 years, female, white, dead, 1492 days
411.7
TCGA-29-1691-01A
51 years, female, white, dead, 1470 days
408.8
TCGA-24-1558-01A
73 years, female, white, dead, 594 days
408.0
TCGA-29-1690-01A
66 years, female, white, dead, 1448 days
407.2
TCGA-23-1027-01A
48 years, female, white, dead, 976 days
406.1
TCGA-61-2098-01A
62 years, female, white, alive, 1993 days
405.8
TCGA-09-1667-01C
61 years, female, white, alive, 1882 days
404.9
TCGA-24-1549-01A
58 years, female, white, dead, 1721 days
404.3
TCGA-24-1469-01A
71 years, female, white, alive, 277 days
403.0
TCGA-04-1365-01A
87 years, female, white, alive, 2329 days
402.7
TCGA-25-1316-01A
55 years, female, white, dead, 1279 days
402.4
TCGA-24-1546-01A
46 years, female, white, dead, 1955 days
400.8
TCGA-24-2262-01A
57 years, female, white, dead, 11 days
400.8
TCGA-25-2409-01A
71 years, female, white, dead, 821 days
400.6
TCGA-57-1584-01A
47 years, female, white, alive, 643 days
400.6
TCGA-13-0908-01B
58 years, female, white, dead, 1843 days
399.7
TCGA-29-1785-01A
55 years, female, white, dead, 1104 days
399.6
TCGA-25-1632-01A
68 years, female, white, dead, 1799 days
395.6
TCGA-13-1512-01A
49 years, female, white, alive, 442 days
395.5
TCGA-29-1776-01A
63 years, female, black or african american, alive, 360 days
394.7
TCGA-61-1724-01A
47 years, female, white, dead, 637 days
394.3
TCGA-09-2056-01B
62 years, female, white, alive, 379 days
394.1
TCGA-29-1762-01A
59 years, female, white, dead, 2634 days
392.3
TCGA-61-2009-01A
65 years, female, white, alive, 1212 days
391.9
TCGA-24-1544-01A
71 years, female, black or african american, dead, 820 days
391.7
TCGA-23-1109-01A
63 years, female, white, dead, 1562 days
390.7
TCGA-24-2281-01A
68 years, female, white, alive, 1357 days
388.5
TCGA-04-1648-01A
57 years, female, white, dead, 871 days
388.1
TCGA-25-1313-01A
62 years, female, white, dead, 820 days
387.6
TCGA-29-1693-01A
72 years, female, white, alive, 3096 days
387.1
TCGA-24-1419-01A
62 years, female, white, alive, 239 days
386.0
TCGA-24-2254-01A
66 years, female, white, dead, 1736 days
382.9
TCGA-13-1498-01A
73 years, female, white, dead, 2012 days
381.5
TCGA-25-1323-01A
72 years, female, white, dead, 395 days
380.5
TCGA-57-1582-01A
female, white, dead, 731 days
380.0
TCGA-23-1030-01A
64 years, female, white, alive, 886 days
379.5
TCGA-20-1687-01A
46 years, female, white, alive, 81 days
379.2
TCGA-24-2026-01A
79 years, female, white, dead, 1059 days
377.1
TCGA-24-1105-01A
36 years, female, white, dead, 1442 days
377.1
TCGA-09-2054-01A
58 years, female, black or african american, dead, 637 days
376.9
TCGA-25-2396-01A
71 years, female, white, dead, 92 days
375.7
TCGA-61-2102-01A
74 years, female, white, dead, 197 days
375.1
TCGA-23-1029-01B
46 years, female, white, alive, 268 days
373.5
TCGA-24-0970-01B
63 years, female, white, dead, 354 days
369.1
TCGA-57-1586-01A
66 years, female, white, alive, 679 days
367.3
TCGA-24-1425-01A
45 years, female, white, alive, 181 days
365.1
TCGA-09-1661-01B
75 years, female, white, dead, 1169 days
362.4
TCGA-13-0795-01A
66 years, female, white, dead, 619 days
357.2
TCGA-24-2024-01A
72 years, female, black or african american, dead, 1769 days
356.2
TCGA-09-1669-01A
54 years, female, white, alive, 928 days
354.8
TCGA-13-0725-01A
44 years, female, white, dead, 377 days
353.5
TCGA-24-1104-01A
56 years, female, white, dead, 1933 days
352.0
TCGA-04-1332-01A
70 years, female, white, dead, 1247 days
351.6
TCGA-VG-A8LO-01A
55 years, female, black or african american, dead, 24 days
350.9
TCGA-13-0883-01A
61 years, female, white, dead, 2097 days
349.7
TCGA-24-1103-01A
50 years, female, black or african american, dead, 1646 days
349.0
TCGA-30-1891-01A
61 years, female, white, dead, 914 days
348.8
TCGA-31-1951-01A
58 years, female, white, alive, 684 days
348.8
TCGA-25-1319-01A
73 years, female, white, dead, 1977 days
348.0
TCGA-24-2027-01A
51 years, female, white, dead, 3337 days
347.8
TCGA-04-1530-01A
68 years, female, white, dead, 3622 days
347.3
TCGA-25-1312-01A
69 years, female, white, dead, 31 days
345.7
TCGA-25-1329-01A
76 years, female, white, dead, 457 days
344.7
TCGA-61-2092-01A
57 years, female, white, alive, 1573 days
344.3
TCGA-09-1659-01B
51 years, female, white, dead, 304 days
341.7
TCGA-13-1507-01A
77 years, female, white, dead, 1993 days
341.6
TCGA-29-1766-01A
74 years, female, white, dead, 1199 days
339.2
TCGA-24-1551-01A
53 years, female, white, dead, 1579 days
338.1
TCGA-13-0920-01A
65 years, female, white, dead, 1484 days
336.6
TCGA-13-0905-01B
51 years, female, white, alive, 3746 days
333.8
TCGA-24-2288-01A
70 years, female, white, dead, 25 days
332.2
TCGA-29-1770-01A
54 years, female, white, alive, 741 days
332.1
TCGA-25-2399-01A
80 years, female, white, dead, 608 days
331.3
TCGA-30-1861-01A
74 years, female, white, dead, 1058 days
329.0
TCGA-23-1023-01A
65 years, female, white, alive, 1233 days
328.7
TCGA-29-1761-01A
80 years, female, asian, dead, 528 days
328.4
TCGA-24-1550-01A
49 years, female, white, dead, 1249 days
327.8
TCGA-36-1571-01A
53 years, female, white, dead, 695 days
327.0
TCGA-13-0897-01A
54 years, female, white, dead, 2182 days
326.7
TCGA-13-1505-01A
63 years, female, white, alive, 1998 days
326.4
TCGA-29-1774-01A
82 years, female, white, alive, 527 days
325.8
TCGA-13-0885-01A
70 years, female, white, alive, 3388 days
325.1
TCGA-24-1557-01A
49 years, female, white, dead, 1213 days
323.1
TCGA-23-1120-01A
60 years, female, white, alive, 130 days
323.0
TCGA-24-1470-01A
54 years, female, white, alive, 105 days
321.9
TCGA-13-1410-01A
57 years, female, white, alive, 2464 days
321.5
TCGA-29-A5NZ-01A
66 years, female, black or african american, dead, 1088 days
320.7
TCGA-09-2048-01A
63 years, female, white, dead, 138 days
320.5
TCGA-24-2298-01A
56 years, female, white, dead, 1620 days
319.0
TCGA-61-2113-01A
54 years, female, white, dead, 676 days
318.9
TCGA-09-1666-01A
57 years, female, white, alive, 1752 days
317.2
TCGA-23-2078-01A
66 years, female, white, alive, 2661 days
317.1
TCGA-29-1694-01A
45 years, female, white, dead, 1187 days
316.6
TCGA-25-1877-01A
81 years, female, white, dead, 730 days
315.9
TCGA-04-1361-01A
57 years, female, white, alive, 989 days
313.3
TCGA-23-1110-01A
42 years, female, white, alive, 1658 days
311.2
TCGA-24-1565-01A
74 years, female, white, dead, 312 days
310.9
TCGA-61-1725-01A
40 years, female, white, alive, 956 days
310.6
TCGA-23-1119-01A
64 years, female, white, alive, 3953 days
309.1
TCGA-13-1511-01A
52 years, female, asian, dead, 1650 days
308.9
TCGA-13-0804-01A
74 years, female, white, dead, 1073 days
307.9
TCGA-25-1315-01A
50 years, female, white, dead, 1583 days
307.5
TCGA-13-0714-01A
55 years, female, white, dead, 189 days
305.8
TCGA-04-1338-01A
78 years, female, white, alive, 1418 days
305.1
TCGA-61-1728-01A
59 years, female, white, alive, 848 days
304.2
TCGA-13-0765-01A
50 years, female, white, dead, 1389 days
304.2
TCGA-24-1616-01A
56 years, female, white, dead, 1163 days
301.3
TCGA-04-1343-01A
72 years, female, white, dead, 361 days
301.3
TCGA-24-1928-01A
77 years, female, white, dead, 336 days
300.1
TCGA-31-1950-01A
76 years, female, white, alive, 571 days
299.1
TCGA-25-1317-01A
66 years, female, white, dead, 61 days
297.7
TCGA-24-2033-01A
87 years, female, white, dead, 562 days
297.6
TCGA-04-1542-01A
52 years, female, white, dead, 2561 days
297.2
TCGA-25-2400-01A
76 years, female, white, dead, 1278 days
296.3
TCGA-29-1777-01A
47 years, female, white, alive, 374 days
294.8
TCGA-25-1634-01A
76 years, female, white, dead, 1091 days
294.1
TCGA-59-2363-01A
female, asian, alive, 165 days
292.1
TCGA-24-0979-01A
53 years, female, white, dead, 1264 days
291.4
TCGA-24-1604-01A
67 years, female, white, dead, 2688 days
290.5
TCGA-13-0886-01A
67 years, female, white, alive, 4665 days
288.8
TCGA-61-2110-01A
56 years, female, white, dead, 1354 days
288.6
TCGA-04-1362-01A
59 years, female, white, dead, 1348 days
288.6
TCGA-13-2060-01A
51 years, female, white, alive, 2369 days
287.9
TCGA-29-1778-01A
77 years, female, white, alive, 454 days
287.8
TCGA-29-2414-01A
75 years, female, white, dead, 2621 days
283.3
TCGA-13-0768-01A
73 years, female, white, dead, 1784 days
283.2
TCGA-04-1347-01A
81 years, female, white, alive, 1919 days
283.1
TCGA-30-1862-01A
65 years, female, white, dead, 186 days
282.5
TCGA-23-1114-01B
55 years, female, white, dead, 2089 days
281.6
TCGA-5X-AA5U-01A
61 years, female, black or african american, alive, 361 days
280.1
TCGA-13-0726-01A
55 years, female, white, dead, 949 days
279.6
TCGA-24-1426-01A
43 years, female, white, alive, 163 days
279.3
TCGA-23-1111-01A
63 years, female, white, alive, 98 days
274.5
TCGA-24-2280-01A
74 years, female, white, alive, 2143 days
274.3
TCGA-09-0364-01A
80 years, female, white, dead, 887 days
273.3
TCGA-10-0927-01A
65 years, female, dead, 2490 days
271.8
TCGA-13-0891-01A
73 years, female, white, dead, 3128 days
270.9
TCGA-09-0367-01A
67 years, female, native hawaiian or other pacific islander, dead, 547 days
269.3
TCGA-23-1024-01A
52 years, female, white, alive, 468 days
268.3
TCGA-24-1418-01A
68 years, female, white, alive, 243 days
264.9
TCGA-13-1403-01A
48 years, female, white, dead, 2345 days
263.5
TCGA-09-2053-01C
72 years, female, white, alive, 1209 days
263.0
TCGA-13-0906-01A
50 years, female, white, alive, 3619 days
261.9
TCGA-09-1668-01B
57 years, female, white, alive, 1684 days
258.3
TCGA-13-1501-01A
50 years, female, white, dead, 1314 days
257.3
TCGA-25-1328-01A
38 years, female, white, dead, 2009 days
257.2
TCGA-13-0720-01A
48 years, female, white, dead, 1355 days
256.6
TCGA-23-1113-01A
48 years, female, white, dead, 949 days
255.5
TCGA-24-1430-01A
68 years, female, white, dead, 863 days
255.3
TCGA-13-0900-01B
59 years, female, white, alive, 4077 days
254.5
TCGA-24-1413-01A
51 years, female, white, alive, 192 days
254.4
TCGA-30-1857-01A
64 years, female, white, dead, 8 days
252.7
TCGA-59-2355-01A
female, white, dead, 65 days
252.4
TCGA-13-0893-01B
48 years, female, black or african american, dead, 1319 days
251.9
TCGA-30-1892-01A
52 years, female, white, dead, 1484 days
251.3
TCGA-04-1356-01A
62 years, female, white, dead, 1499 days
250.5
TCGA-24-2271-01A
55 years, female, asian, dead, 962 days
250.4
TCGA-13-A5FT-01A
67 years, female, black or african american, alive, 2143 days
249.6
TCGA-24-1431-01A
67 years, female, white, dead, 567 days
246.3
TCGA-23-1118-01A
45 years, female, white, alive, 2616 days
244.9
TCGA-24-1552-01A
77 years, female, white, dead, 1259 days
240.9
TCGA-13-1483-01A
61 years, female, white, dead, 895 days
237.8
TCGA-36-1570-01A
49 years, female, white, alive, 655 days
234.2
TCGA-13-1497-01A
48 years, female, white, alive, 3871 days
234.0
TCGA-24-1467-01A
51 years, female, white, dead, 3224 days
232.5
TCGA-13-0916-01A
49 years, female, white, alive, 1785 days
230.8
TCGA-13-0797-01A
49 years, female, white, alive, 2121 days
227.8
TCGA-24-1464-01A
70 years, female, white, dead, 379 days
226.6
TCGA-04-1519-01A
48 years, female, alive, 24 days
225.5
TCGA-13-1495-01A
60 years, female, white, dead, 2749 days
223.7
TCGA-30-1866-01A
61 years, female, white, dead, 1114 days
220.8
TCGA-24-1923-01A
51 years, female, white, dead, 690 days
218.8
TCGA-13-1404-01A
48 years, female, white, alive, 2469 days
217.2
TCGA-04-1514-01A
45 years, female, white, dead, 1720 days
214.7
TCGA-13-1488-01A
59 years, female, white, dead, 2154 days
214.1
TCGA-04-1655-01A
49 years, female, white, dead, 1380 days
213.0
TCGA-13-1408-01A
59 years, female, white, dead, 1680 days
211.9
TCGA-13-1409-01A
73 years, female, white, dead, 1742 days
211.7
TCGA-23-1028-01A
43 years, female, white, alive, 1503 days
210.1
TCGA-10-0937-01A
44 years, female, white, dead, 608 days
209.3
TCGA-13-1499-01A
56 years, female, white, alive, 3500 days
209.3
TCGA-29-1703-01A
56 years, female, black or african american, dead, 1815 days
207.5
TCGA-61-2000-01A
67 years, female, white, alive, 441 days
207.3
TCGA-04-1341-01A
85 years, female, white, alive, 33 days
205.5
TCGA-24-1845-01A
42 years, female, white, alive, 116 days
205.3
TCGA-24-1416-01A
34 years, female, white, alive, 194 days
205.3
TCGA-13-1509-01A
64 years, female, white, alive, 2438 days
203.7
TCGA-24-2036-01A
50 years, female, white, dead, 1947 days
203.4
TCGA-24-2038-01A
68 years, female, white, dead, 1354 days
202.3
TCGA-13-1477-01A
49 years, female, white, dead, 1662 days
202.2
TCGA-36-1577-01A
43 years, female, asian, alive, 783 days
201.2
TCGA-13-0762-01A
65 years, female, white, alive, 3400 days
200.2
TCGA-13-1485-01A
48 years, female, white, dead, 629 days
198.8
TCGA-OY-A56Q-01A
78 years, female, black or african american, alive, 576 days
197.9
TCGA-23-1021-01B
45 years, female, white, dead, 1446 days
192.6
TCGA-24-1471-01A
60 years, female, white, alive, 36 days
191.8
TCGA-09-1665-01B
74 years, female, white, dead, 1266 days
190.3
TCGA-13-1487-01A
74 years, female, white, dead, 681 days
185.8
TCGA-25-2393-01A
81 years, female, white, dead, 1157 days
183.6
TCGA-13-0884-01B
39 years, female, white, dead, 3260 days
181.6
TCGA-23-1107-01A
59 years, female, white, dead, 9 days
181.2
TCGA-04-1331-01A
79 years, female, white, dead, 1336 days
179.5
TCGA-04-1350-01A
46 years, female, white, dead, 1946 days
178.5
TCGA-29-1769-01A
40 years, female, white, alive, 699 days
177.3
TCGA-13-1496-01A
65 years, female, white, dead, 129 days
176.2
TCGA-24-0982-01A
77 years, female, white, dead, 679 days
175.7
TCGA-10-0933-01A
77 years, female, white, dead, 446 days
175.6
TCGA-24-0966-01A
78 years, female, black or african american, alive, 232 days
175.4
TCGA-13-1492-01A
66 years, female, white, dead, 3819 days
172.7
TCGA-10-0936-01A
69 years, female, black or african american, dead, 1123 days
171.5
TCGA-04-1651-01A
53 years, female, white, dead, 1102 days
168.5
TCGA-13-0800-01A
52 years, female, white, alive, 2661 days
162.8
TCGA-10-0928-01A
71 years, female, white, dead, 563 days
162.7
TCGA-13-0724-01A
72 years, female, white, dead, 83 days
158.4
TCGA-23-1022-01A
67 years, female, white, dead, 1511 days
156.1
TCGA-13-1407-01A
51 years, female, white, alive, 2534 days
154.8
TCGA-29-1696-01A
43 years, female, white, dead, 1032 days
152.1
TCGA-13-0887-01A
42 years, female, white, dead, 2028 days
148.6
TCGA-13-0888-01A
78 years, female, white, dead, 2811 days
147.4
TCGA-WR-A838-01A
72 years, female, black or african american, dead, 304 days
142.6
TCGA-04-1536-01A
60 years, female, black or african american, dead, 885 days
140.7
TCGA-20-1686-01A
75 years, female, white, alive, 89 days
139.1
TCGA-13-0901-01B
42 years, female, asian, alive, 589 days
138.7
TCGA-04-1364-01A
61 years, female, white, dead, 1024 days
136.7
TCGA-10-0931-01A
44 years, female, white, dead, 1000 days
136.1
TCGA-10-0938-01A
80 years, female, white, dead, 636 days
135.2
TCGA-30-1714-01A
68 years, female, white, dead, 1158 days
133.7
TCGA-30-1853-01A
58 years, female, white, dead, 1103 days
130.4
TCGA-13-1510-01A
62 years, female, white, dead, 1359 days
128.4
TCGA-13-1489-01A
70 years, female, white, dead, 2553 days
117.6
TCGA-61-2088-01A
51 years, female, white, alive, 145 days
110.9
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OVARIAN CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.