Cell type atlas - MYADM - The Human Protein Atlas

We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.

MYADM

SUMMARY

TISSUE

CELL TYPE

PATHOLOGY

BRAIN

BLOOD

CELL

GENERAL INFORMATIONⁱ General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.
Gene nameⁱ Official gene symbol, which is typically a short form of the gene name, according to HGNC.	MYADM
Gene descriptionⁱ Full gene name according to HGNC.	Myeloid associated differentiation marker
Protein classⁱ Assigned HPA protein class(es) for the encoded protein(s). Read more	Transporters
Predicted locationⁱ All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions. Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached. Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s). The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location. Read more	Membrane
Number of transcriptsⁱ Number of protein-coding transcripts from the gene as defined by Ensembl.	9

HUMAN PROTEIN ATLAS INFORMATIONⁱ Summary of RNA expression and protein localization based on data generated within the Human Protein Atlas project.
Single cell type specificityⁱ The RNA specificity category is based on mRNA expression levels in the analyzed cell types based on scRNA-seq data from normal tissues. The categories include: cell type enriched, group enriched, cell type enhanced, low cell type specificity and not detected. Read more	Cell type enhanced (granulocytes)
Blood cell specificityⁱ The RNA specificity category is based on mRNA expression levels in the analyzed samples based on data from HPA. The categories include: cell type enriched, group enriched, cell type enhanced, low cell type specificity and not detected. Read more	Cell type enhanced (neutrophil)
Blood cell distributionⁱ The RNA distribution category is based on mRNA expression levels in the analyzed samples based on data from HPA. The categories include: detected in all, detected in many, detected in some, detected in single and not detected. Read more	Detected in all
Cell line specificityⁱ RNA specificity category based on RNA sequencing data from all cell lines in the Human Protein Atlas. Genes are classified into six different categories (enriched, group enriched, enhanced, low specificity and not detected) according to their RNA expression levels across the panel of cell lines.	Low cell line specificity
Cell line distributionⁱ RNA distribution category based on RNA sequencing data from all cell lines in the Human Protein Atlas. Genes are classified into five different categories (detected in all, detected in many, detected in some, detected in single and not detected) according to their pattern of detected RNA expression across the panel of cell lines.	Detected in many
Protein evidenceⁱ Evidence score for genes based on UniProt protein existence (UniProt evidence); a Human Protein Atlas antibody- or RNA based score (HPA evidence); and evidence based on PeptideAtlas (MS evidence). The avaliable scores are evidence at protein level, evidence at transcript level, no evidence, or not avaliable. Read more	Evidence at protein level

SINGLE CELL TYPESⁱ A summary of single cell RNA (NX) from all single cell types. Color-coding is based on cell type groups, each consisting of cell types with functional features in common.
Single cell types Group Expression Alphabetical RNA single cell type specificity: Cell type enhanced (granulocytes)

SINGLE CELL TISSUESⁱ Single cell RNA in cell types from tissue are shown separately for each analyzed tissue. For easier navigation across tissues, use the grey browser on the left side of the window. Barchart shows pTPM levels in each cluster of single cells. To the left, a UMAP plot illustrates the RNA expression profile. The tissue name and plots are clickable and redirect to a more detailed interactive page. Color-coding is based on cell type groups, each consisting of cell types with functional features in common. Please note that the same cell type may be found in several clusters.
Cluster Expression Alphabetical Colon
Cluster Expression Alphabetical Eye
Cluster Expression Alphabetical Heart muscle
Cluster Expression Alphabetical Kidney
Cluster Expression Alphabetical Liver
Cluster Expression Alphabetical Lung
Cluster Expression Alphabetical Pancreas
Cluster Expression Alphabetical Placenta
Cluster Expression Alphabetical Prostate
Cluster Expression Alphabetical Rectum
Cluster Expression Alphabetical Skin
Cluster Expression Alphabetical Small intestine
Cluster Expression Alphabetical Testis

BLOODⁱ

Single cell data

Cluster

Expression

Alphabetical

PBMC

Flow sorted data

Lineage

Expression

Alphabetical

CELL LINESⁱ RNA expression data (NX) of tissue culture cell lines.The analyzed cell lines are divided into 16 color-coded groups according to the organ they were obtained from. Detailed information about a specific cell line is revealed by hovering over the corresponding bar in the chart. The chart is clickable and redirects to more Cell Atlas data. Read more
Organ Expression Alphabetical

Alveolar cells type 1	152 NX
Lung	152 NX

Alveolar cells type 2	59 NX
Lung	59 NX

B-cells	30 NX
Colon	176 NX
Liver	28 NX
Kidney	18 NX

Basal glandular cells	150 NX
Prostate	150 NX

Basal keratinocytes	92 NX
Skin	92 NX

Bipolar cells	4 NX
Eye	4 NX

Cardiomyocytes	58 NX
Heart muscle	58 NX

Cholangiocytes	43 NX
Liver	43 NX

Ciliated cells	58 NX
Lung	58 NX

Club cells	119 NX
Lung	119 NX

Collecting duct cells	19 NX
Kidney	19 NX

Cone photoreceptor cells	4 NX
Eye	4 NX

Cytotrophoblasts	33 NX
Placenta	33 NX

Distal tubular cells	0 NX
Kidney	0 NX

Ductal cells	108 NX
Pancreas	108 NX

Early spermatids	2 NX
Testis	2 NX

Endothelial cells	93 NX
Lung	160 NX
Eye	159 NX
Skin	139 NX
Liver	133 NX
Pancreas	93 NX
Heart muscle	84 NX
Placenta	66 NX
Prostate	61 NX
Testis	16 NX

Enterocytes	5 NX
Colon	33 NX
Rectum	13 NX
Small intestine	3 NX

Erythroid cells	0 NX
Liver	0 NX

Exocrine glandular cells	45 NX
Pancreas	45 NX

Extravillous trophoblasts	209 NX
Placenta	209 NX

Fibroblasts	179 NX
Lung	361 NX
Skin	260 NX
Placenta	119 NX
Prostate	115 NX
Heart muscle	95 NX

Glandular cells	42 NX
Prostate	42 NX

Granulocytes	336 NX
Lung	370 NX
Colon	303 NX

Hepatocytes	16 NX
Liver	16 NX

Hofbauer cells	70 NX
Placenta	70 NX

Horizontal cells	10 NX
Eye	10 NX

Intestinal endocrine cells	194 NX
Colon	255 NX
Rectum	133 NX

Ito cells	115 NX
Liver	115 NX

Kupffer cells	66 NX
Liver	66 NX

Late spermatids	2 NX
Testis	2 NX

Leydig cells	83 NX
Testis	83 NX

Macrophages	144 NX
Skin	188 NX
Lung	178 NX
Testis	122 NX
Prostate	97 NX
Pancreas	54 NX
Kidney	42 NX

Melanocytes	57 NX
Skin	57 NX

Mixed cell types	NX
Pancreas	NX

Mixed immune cells	NX
Heart muscle	NX

Monocytes	15 NX
Pancreas	15 NX

Mucus-secreting cells	92 NX
Colon	376 NX
Rectum	108 NX
Small intestine	49 NX

Muller glia cells	2 NX
Eye	2 NX

Pancreatic endocrine cells	54 NX
Pancreas	54 NX

Paneth cells	53 NX
Small intestine	81 NX
Rectum	53 NX
Colon	17 NX

Peritubular cells	110 NX
Testis	110 NX

Proximal tubular cells	0 NX
Kidney	0 NX

Rod photoreceptor cells	1 NX
Eye	1 NX

Sertoli cells	149 NX
Testis	149 NX

Smooth muscle cells	158 NX
Heart muscle	175 NX
Prostate	158 NX
Skin	148 NX
Pancreas	118 NX

Spermatocytes	22 NX
Testis	22 NX

Spermatogonia	8 NX
Testis	8 NX

Suprabasal keratinocytes	52 NX
Skin	52 NX

Syncytiotrophoblasts	41 NX
Placenta	41 NX

T-cells	54 NX
Prostate	410 NX
Colon	188 NX
Skin	159 NX
Lung	106 NX
Kidney	45 NX
Liver	26 NX

Undifferentiated cells	66 NX
Rectum	87 NX
Colon	83 NX
Small intestine	45 NX

Urothelial cells	78 NX
Prostate	78 NX

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.