Cell type atlas - UCP2 - The Human Protein Atlas

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UCP2

SUMMARY

TISSUE

CELL TYPE

PATHOLOGY

BRAIN

BLOOD

CELL

GENERAL INFORMATIONⁱ General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.
Gene nameⁱ Official gene symbol, which is typically a short form of the gene name, according to HGNC.	UCP2
Gene descriptionⁱ Full gene name according to HGNC.	Uncoupling protein 2
Protein classⁱ Assigned HPA protein class(es) for the encoded protein(s). Read more	Transporters
Predicted locationⁱ All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions. Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached. Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s). The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location. Read more	Intracellular
Number of transcriptsⁱ Number of protein-coding transcripts from the gene as defined by Ensembl.	5

HUMAN PROTEIN ATLAS INFORMATIONⁱ Summary of RNA expression and protein localization based on data generated within the Human Protein Atlas project.
Single cell type specificityⁱ The RNA specificity category is based on mRNA expression levels in the analyzed cell types based on scRNA-seq data from normal tissues. The categories include: cell type enriched, group enriched, cell type enhanced, low cell type specificity and not detected. Read more	Cell type enhanced (monocytes, Erythroid cells, Hofbauer cells, Intestinal endocrine cells)
Blood cell specificityⁱ The RNA specificity category is based on mRNA expression levels in the analyzed samples based on data from HPA. The categories include: cell type enriched, group enriched, cell type enhanced, low cell type specificity and not detected. Read more	Low cell type specificity
Blood cell distributionⁱ The RNA distribution category is based on mRNA expression levels in the analyzed samples based on data from HPA. The categories include: detected in all, detected in many, detected in some, detected in single and not detected. Read more	Detected in all
Cell line specificityⁱ RNA specificity category based on RNA sequencing data from all cell lines in the Human Protein Atlas. Genes are classified into six different categories (enriched, group enriched, enhanced, low specificity and not detected) according to their RNA expression levels across the panel of cell lines.	Cell line enhanced (Daudi, SK-BR-3, U-698)
Cell line distributionⁱ RNA distribution category based on RNA sequencing data from all cell lines in the Human Protein Atlas. Genes are classified into five different categories (detected in all, detected in many, detected in some, detected in single and not detected) according to their pattern of detected RNA expression across the panel of cell lines.	Detected in many
Protein evidenceⁱ Evidence score for genes based on UniProt protein existence (UniProt evidence); a Human Protein Atlas antibody- or RNA based score (HPA evidence); and evidence based on PeptideAtlas (MS evidence). The avaliable scores are evidence at protein level, evidence at transcript level, no evidence, or not avaliable. Read more	Evidence at protein level

SINGLE CELL TYPESⁱ A summary of single cell RNA (NX) from all single cell types. Color-coding is based on cell type groups, each consisting of cell types with functional features in common.
Single cell types Group Expression Alphabetical RNA single cell type specificity: Cell type enhanced (monocytes, Erythroid cells, Hofbauer cells, Intestinal endocrine cells)

SINGLE CELL TISSUESⁱ Single cell RNA in cell types from tissue are shown separately for each analyzed tissue. For easier navigation across tissues, use the grey browser on the left side of the window. Barchart shows pTPM levels in each cluster of single cells. To the left, a UMAP plot illustrates the RNA expression profile. The tissue name and plots are clickable and redirect to a more detailed interactive page. Color-coding is based on cell type groups, each consisting of cell types with functional features in common. Please note that the same cell type may be found in several clusters.
Cluster Expression Alphabetical Colon
Cluster Expression Alphabetical Eye
Cluster Expression Alphabetical Heart muscle
Cluster Expression Alphabetical Kidney
Cluster Expression Alphabetical Liver
Cluster Expression Alphabetical Lung
Cluster Expression Alphabetical Pancreas
Cluster Expression Alphabetical Placenta
Cluster Expression Alphabetical Prostate
Cluster Expression Alphabetical Rectum
Cluster Expression Alphabetical Skin
Cluster Expression Alphabetical Small intestine
Cluster Expression Alphabetical Testis

BLOODⁱ

Single cell data

Cluster

Expression

Alphabetical

PBMC

Flow sorted data

Lineage

Expression

Alphabetical

CELL LINESⁱ RNA expression data (NX) of tissue culture cell lines.The analyzed cell lines are divided into 16 color-coded groups according to the organ they were obtained from. Detailed information about a specific cell line is revealed by hovering over the corresponding bar in the chart. The chart is clickable and redirects to more Cell Atlas data. Read more
Organ Expression Alphabetical

Alveolar cells type 1	3 NX
Lung	3 NX

Alveolar cells type 2	35 NX
Lung	35 NX

B-cells	251 NX
Colon	288 NX
Kidney	250 NX
Liver	177 NX

Basal glandular cells	2 NX
Prostate	2 NX

Basal keratinocytes	3 NX
Skin	3 NX

Bipolar cells	1 NX
Eye	1 NX

Cardiomyocytes	4 NX
Heart muscle	4 NX

Cholangiocytes	3 NX
Liver	3 NX

Ciliated cells	94 NX
Lung	94 NX

Club cells	24 NX
Lung	24 NX

Collecting duct cells	87 NX
Kidney	87 NX

Cone photoreceptor cells	8 NX
Eye	8 NX

Cytotrophoblasts	7 NX
Placenta	7 NX

Distal tubular cells	7 NX
Kidney	7 NX

Ductal cells	1 NX
Pancreas	1 NX

Early spermatids	16 NX
Testis	16 NX

Endothelial cells	5 NX
Skin	74 NX
Lung	26 NX
Eye	19 NX
Placenta	5 NX
Liver	5 NX
Heart muscle	5 NX
Prostate	1 NX
Testis	1 NX
Pancreas	0 NX

Enterocytes	4 NX
Colon	5 NX
Rectum	4 NX
Small intestine	4 NX

Erythroid cells	420 NX
Liver	420 NX

Exocrine glandular cells	7 NX
Pancreas	7 NX

Extravillous trophoblasts	10 NX
Placenta	10 NX

Fibroblasts	7 NX
Placenta	27 NX
Lung	20 NX
Skin	6 NX
Prostate	3 NX
Heart muscle	0 NX

Glandular cells	16 NX
Prostate	16 NX

Granulocytes	84 NX
Colon	92 NX
Lung	77 NX

Hepatocytes	1 NX
Liver	1 NX

Hofbauer cells	379 NX
Placenta	379 NX

Horizontal cells	0 NX
Eye	0 NX

Intestinal endocrine cells	286 NX
Rectum	286 NX
Colon	285 NX

Ito cells	12 NX
Liver	12 NX

Kupffer cells	244 NX
Liver	244 NX

Late spermatids	38 NX
Testis	38 NX

Leydig cells	1 NX
Testis	1 NX

Macrophages	160 NX
Pancreas	360 NX
Prostate	289 NX
Kidney	258 NX
Skin	146 NX
Lung	109 NX
Testis	104 NX

Melanocytes	25 NX
Skin	25 NX

Mixed cell types	NX
Pancreas	NX

Mixed immune cells	NX
Heart muscle	NX

Monocytes	711 NX
Pancreas	711 NX

Mucus-secreting cells	23 NX
Small intestine	33 NX
Rectum	32 NX
Colon	15 NX

Muller glia cells	3 NX
Eye	3 NX

Pancreatic endocrine cells	3 NX
Pancreas	3 NX

Paneth cells	38 NX
Small intestine	81 NX
Rectum	38 NX
Colon	9 NX

Peritubular cells	0 NX
Testis	0 NX

Proximal tubular cells	2 NX
Kidney	2 NX

Rod photoreceptor cells	6 NX
Eye	6 NX

Sertoli cells	7 NX
Testis	7 NX

Smooth muscle cells	5 NX
Pancreas	17 NX
Skin	6 NX
Prostate	5 NX
Heart muscle	4 NX

Spermatocytes	14 NX
Testis	14 NX

Spermatogonia	13 NX
Testis	13 NX

Suprabasal keratinocytes	4 NX
Skin	4 NX

Syncytiotrophoblasts	9 NX
Placenta	9 NX

T-cells	173 NX
Kidney	257 NX
Liver	212 NX
Lung	203 NX
Colon	173 NX
Skin	92 NX
Prostate	74 NX

Undifferentiated cells	25 NX
Small intestine	26 NX
Colon	25 NX
Rectum	16 NX

Urothelial cells	22 NX
Prostate	22 NX

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.