Cell type atlas - RPL26 - The Human Protein Atlas

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RPL26

SUMMARY

TISSUE

CELL TYPE

PATHOLOGY

BRAIN

BLOOD

CELL

GENERAL INFORMATIONⁱ General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.
Gene nameⁱ Official gene symbol, which is typically a short form of the gene name, according to HGNC.	RPL26
Gene descriptionⁱ Full gene name according to HGNC.	Ribosomal protein L26
Protein classⁱ Assigned HPA protein class(es) for the encoded protein(s). Read more	Disease related genes Ribosomal proteins
Predicted locationⁱ All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions. Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached. Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s). The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location. Read more	Intracellular
Number of transcriptsⁱ Number of protein-coding transcripts from the gene as defined by Ensembl.	8

HUMAN PROTEIN ATLAS INFORMATIONⁱ Summary of RNA expression and protein localization based on data generated within the Human Protein Atlas project.
Single cell type specificityⁱ The RNA specificity category is based on mRNA expression levels in the analyzed cell types based on scRNA-seq data from normal tissues. The categories include: cell type enriched, group enriched, cell type enhanced, low cell type specificity and not detected. Read more	Low cell type specificity
Blood cell specificityⁱ The RNA specificity category is based on mRNA expression levels in the analyzed samples based on data from HPA. The categories include: cell type enriched, group enriched, cell type enhanced, low cell type specificity and not detected. Read more	Low cell type specificity
Blood cell distributionⁱ The RNA distribution category is based on mRNA expression levels in the analyzed samples based on data from HPA. The categories include: detected in all, detected in many, detected in some, detected in single and not detected. Read more	Detected in all
Cell line specificityⁱ RNA specificity category based on RNA sequencing data from all cell lines in the Human Protein Atlas. Genes are classified into six different categories (enriched, group enriched, enhanced, low specificity and not detected) according to their RNA expression levels across the panel of cell lines.	Low cell line specificity
Cell line distributionⁱ RNA distribution category based on RNA sequencing data from all cell lines in the Human Protein Atlas. Genes are classified into five different categories (detected in all, detected in many, detected in some, detected in single and not detected) according to their pattern of detected RNA expression across the panel of cell lines.	Detected in all
Protein evidenceⁱ Evidence score for genes based on UniProt protein existence (UniProt evidence); a Human Protein Atlas antibody- or RNA based score (HPA evidence); and evidence based on PeptideAtlas (MS evidence). The avaliable scores are evidence at protein level, evidence at transcript level, no evidence, or not avaliable. Read more	Evidence at protein level

SINGLE CELL TYPESⁱ A summary of single cell RNA (NX) from all single cell types. Color-coding is based on cell type groups, each consisting of cell types with functional features in common.
Single cell types Group Expression Alphabetical RNA single cell type specificity: Low cell type specificity

SINGLE CELL TISSUESⁱ Single cell RNA in cell types from tissue are shown separately for each analyzed tissue. For easier navigation across tissues, use the grey browser on the left side of the window. Barchart shows pTPM levels in each cluster of single cells. To the left, a UMAP plot illustrates the RNA expression profile. The tissue name and plots are clickable and redirect to a more detailed interactive page. Color-coding is based on cell type groups, each consisting of cell types with functional features in common. Please note that the same cell type may be found in several clusters.
Cluster Expression Alphabetical Colon
Cluster Expression Alphabetical Eye
Cluster Expression Alphabetical Heart muscle
Cluster Expression Alphabetical Kidney
Cluster Expression Alphabetical Liver
Cluster Expression Alphabetical Lung
Cluster Expression Alphabetical Pancreas
Cluster Expression Alphabetical Placenta
Cluster Expression Alphabetical Prostate
Cluster Expression Alphabetical Rectum
Cluster Expression Alphabetical Skin
Cluster Expression Alphabetical Small intestine
Cluster Expression Alphabetical Testis

BLOODⁱ

Single cell data

Cluster

Expression

Alphabetical

PBMC

Flow sorted data

Lineage

Expression

Alphabetical

CELL LINESⁱ RNA expression data (NX) of tissue culture cell lines.The analyzed cell lines are divided into 16 color-coded groups according to the organ they were obtained from. Detailed information about a specific cell line is revealed by hovering over the corresponding bar in the chart. The chart is clickable and redirects to more Cell Atlas data. Read more
Organ Expression Alphabetical

Alveolar cells type 1	834 NX
Lung	834 NX

Alveolar cells type 2	960 NX
Lung	960 NX

B-cells	5357 NX
Liver	5893 NX
Kidney	5489 NX
Colon	1489 NX

Basal glandular cells	2721 NX
Prostate	2721 NX

Basal keratinocytes	4955 NX
Skin	4955 NX

Bipolar cells	235 NX
Eye	235 NX

Cardiomyocytes	252 NX
Heart muscle	252 NX

Cholangiocytes	2798 NX
Liver	2798 NX

Ciliated cells	960 NX
Lung	960 NX

Club cells	1910 NX
Lung	1910 NX

Collecting duct cells	953 NX
Kidney	953 NX

Cone photoreceptor cells	126 NX
Eye	126 NX

Cytotrophoblasts	3974 NX
Placenta	3974 NX

Distal tubular cells	3344 NX
Kidney	3344 NX

Ductal cells	2212 NX
Pancreas	2212 NX

Early spermatids	696 NX
Testis	696 NX

Endothelial cells	2535 NX
Testis	4225 NX
Liver	3904 NX
Skin	3875 NX
Placenta	3281 NX
Prostate	2535 NX
Pancreas	1891 NX
Lung	1278 NX
Eye	943 NX
Heart muscle	123 NX

Enterocytes	1389 NX
Small intestine	2900 NX
Rectum	1288 NX
Colon	1257 NX

Erythroid cells	1425 NX
Liver	1425 NX

Exocrine glandular cells	4263 NX
Pancreas	4263 NX

Extravillous trophoblasts	6093 NX
Placenta	6093 NX

Fibroblasts	2981 NX
Lung	3165 NX
Skin	3044 NX
Placenta	3039 NX
Prostate	1412 NX
Heart muscle	180 NX

Glandular cells	2438 NX
Prostate	2438 NX

Granulocytes	1778 NX
Lung	2500 NX
Colon	1056 NX

Hepatocytes	2308 NX
Liver	2308 NX

Hofbauer cells	2989 NX
Placenta	2989 NX

Horizontal cells	129 NX
Eye	129 NX

Intestinal endocrine cells	2199 NX
Rectum	3279 NX
Colon	1118 NX

Ito cells	2803 NX
Liver	2803 NX

Kupffer cells	4763 NX
Liver	4763 NX

Late spermatids	1401 NX
Testis	1401 NX

Leydig cells	4423 NX
Testis	4423 NX

Macrophages	3635 NX
Testis	5954 NX
Skin	5697 NX
Kidney	4578 NX
Prostate	2677 NX
Lung	2088 NX
Pancreas	1231 NX

Melanocytes	3033 NX
Skin	3033 NX

Mixed cell types	NX
Pancreas	NX

Mixed immune cells	NX
Heart muscle	NX

Monocytes	3720 NX
Pancreas	3720 NX

Mucus-secreting cells	3655 NX
Rectum	6683 NX
Small intestine	3095 NX
Colon	2187 NX

Muller glia cells	301 NX
Eye	301 NX

Pancreatic endocrine cells	3634 NX
Pancreas	3634 NX

Paneth cells	3237 NX
Rectum	4968 NX
Small intestine	3237 NX
Colon	1589 NX

Peritubular cells	2028 NX
Testis	2028 NX

Proximal tubular cells	4497 NX
Kidney	4497 NX

Rod photoreceptor cells	341 NX
Eye	341 NX

Sertoli cells	1488 NX
Testis	1488 NX

Smooth muscle cells	2382 NX
Skin	3607 NX
Pancreas	2382 NX
Prostate	1779 NX
Heart muscle	115 NX

Spermatocytes	569 NX
Testis	569 NX

Spermatogonia	578 NX
Testis	578 NX

Suprabasal keratinocytes	6201 NX
Skin	6201 NX

Syncytiotrophoblasts	3821 NX
Placenta	3821 NX

T-cells	3284 NX
Skin	5533 NX
Kidney	4599 NX
Liver	3594 NX
Prostate	2401 NX
Lung	1964 NX
Colon	1222 NX

Undifferentiated cells	5356 NX
Rectum	5908 NX
Small intestine	5556 NX
Colon	1592 NX

Urothelial cells	2887 NX
Prostate	2887 NX

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.