Cell type atlas - DUSP2 - The Human Protein Atlas

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DUSP2

SUMMARY

TISSUE

CELL TYPE

PATHOLOGY

BRAIN

BLOOD

CELL

GENERAL INFORMATIONⁱ General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.
Gene nameⁱ Official gene symbol, which is typically a short form of the gene name, according to HGNC.	DUSP2
Gene descriptionⁱ Full gene name according to HGNC.	Dual specificity phosphatase 2
Protein classⁱ Assigned HPA protein class(es) for the encoded protein(s). Read more	Enzymes
Predicted locationⁱ All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions. Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached. Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s). The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location. Read more	Intracellular
Number of transcriptsⁱ Number of protein-coding transcripts from the gene as defined by Ensembl.	1

HUMAN PROTEIN ATLAS INFORMATIONⁱ Summary of RNA expression and protein localization based on data generated within the Human Protein Atlas project.
Single cell type specificityⁱ The RNA specificity category is based on mRNA expression levels in the analyzed cell types based on scRNA-seq data from normal tissues. The categories include: cell type enriched, group enriched, cell type enhanced, low cell type specificity and not detected. Read more	Cell type enhanced (T-cells, Melanocytes)
Blood cell specificityⁱ The RNA specificity category is based on mRNA expression levels in the analyzed samples based on data from HPA. The categories include: cell type enriched, group enriched, cell type enhanced, low cell type specificity and not detected. Read more	Cell type enhanced (gdT-cell)
Blood cell distributionⁱ The RNA distribution category is based on mRNA expression levels in the analyzed samples based on data from HPA. The categories include: detected in all, detected in many, detected in some, detected in single and not detected. Read more	Detected in many
Cell line specificityⁱ RNA specificity category based on RNA sequencing data from all cell lines in the Human Protein Atlas. Genes are classified into six different categories (enriched, group enriched, enhanced, low specificity and not detected) according to their RNA expression levels across the panel of cell lines.	Cell line enhanced (Daudi, HeLa, JURKAT, Karpas-707, NB-4, RT4, SCLC-21H, U-698)
Cell line distributionⁱ RNA distribution category based on RNA sequencing data from all cell lines in the Human Protein Atlas. Genes are classified into five different categories (detected in all, detected in many, detected in some, detected in single and not detected) according to their pattern of detected RNA expression across the panel of cell lines.	Detected in many
Protein evidenceⁱ Evidence score for genes based on UniProt protein existence (UniProt evidence); a Human Protein Atlas antibody- or RNA based score (HPA evidence); and evidence based on PeptideAtlas (MS evidence). The avaliable scores are evidence at protein level, evidence at transcript level, no evidence, or not avaliable. Read more	Evidence at protein level

SINGLE CELL TYPESⁱ A summary of single cell RNA (NX) from all single cell types. Color-coding is based on cell type groups, each consisting of cell types with functional features in common.
Single cell types Group Expression Alphabetical RNA single cell type specificity: Cell type enhanced (T-cells, Melanocytes)

SINGLE CELL TISSUESⁱ Single cell RNA in cell types from tissue are shown separately for each analyzed tissue. For easier navigation across tissues, use the grey browser on the left side of the window. Barchart shows pTPM levels in each cluster of single cells. To the left, a UMAP plot illustrates the RNA expression profile. The tissue name and plots are clickable and redirect to a more detailed interactive page. Color-coding is based on cell type groups, each consisting of cell types with functional features in common. Please note that the same cell type may be found in several clusters.
Cluster Expression Alphabetical Colon
Cluster Expression Alphabetical Eye
Cluster Expression Alphabetical Heart muscle
Cluster Expression Alphabetical Kidney
Cluster Expression Alphabetical Liver
Cluster Expression Alphabetical Lung
Cluster Expression Alphabetical Pancreas
Cluster Expression Alphabetical Placenta
Cluster Expression Alphabetical Prostate
Cluster Expression Alphabetical Rectum
Cluster Expression Alphabetical Skin
Cluster Expression Alphabetical Small intestine
Cluster Expression Alphabetical Testis

BLOODⁱ

Single cell data

Cluster

Expression

Alphabetical

PBMC

Flow sorted data

Lineage

Expression

Alphabetical

CELL LINESⁱ RNA expression data (NX) of tissue culture cell lines.The analyzed cell lines are divided into 16 color-coded groups according to the organ they were obtained from. Detailed information about a specific cell line is revealed by hovering over the corresponding bar in the chart. The chart is clickable and redirects to more Cell Atlas data. Read more
Organ Expression Alphabetical

Alveolar cells type 1	0 NX
Lung	0 NX

Alveolar cells type 2	11 NX
Lung	11 NX

B-cells	48 NX
Colon	214 NX
Kidney	54 NX
Liver	41 NX

Basal glandular cells	90 NX
Prostate	90 NX

Basal keratinocytes	86 NX
Skin	86 NX

Bipolar cells	22 NX
Eye	22 NX

Cardiomyocytes	34 NX
Heart muscle	34 NX

Cholangiocytes	3 NX
Liver	3 NX

Ciliated cells	0 NX
Lung	0 NX

Club cells	1 NX
Lung	1 NX

Collecting duct cells	9 NX
Kidney	9 NX

Cone photoreceptor cells	22 NX
Eye	22 NX

Cytotrophoblasts	1 NX
Placenta	1 NX

Distal tubular cells	2 NX
Kidney	2 NX

Ductal cells	1 NX
Pancreas	1 NX

Early spermatids	1 NX
Testis	1 NX

Endothelial cells	8 NX
Eye	137 NX
Skin	52 NX
Prostate	21 NX
Testis	8 NX
Heart muscle	8 NX
Lung	6 NX
Liver	2 NX
Placenta	2 NX
Pancreas	0 NX

Enterocytes	3 NX
Colon	9 NX
Rectum	3 NX
Small intestine	1 NX

Erythroid cells	0 NX
Liver	0 NX

Exocrine glandular cells	1 NX
Pancreas	1 NX

Extravillous trophoblasts	1 NX
Placenta	1 NX

Fibroblasts	24 NX
Lung	39 NX
Skin	29 NX
Prostate	28 NX
Heart muscle	12 NX
Placenta	6 NX

Glandular cells	64 NX
Prostate	64 NX

Granulocytes	106 NX
Colon	184 NX
Lung	28 NX

Hepatocytes	3 NX
Liver	3 NX

Hofbauer cells	76 NX
Placenta	76 NX

Horizontal cells	0 NX
Eye	0 NX

Intestinal endocrine cells	84 NX
Colon	112 NX
Rectum	56 NX

Ito cells	9 NX
Liver	9 NX

Kupffer cells	28 NX
Liver	27 NX

Late spermatids	1 NX
Testis	1 NX

Leydig cells	2 NX
Testis	2 NX

Macrophages	91 NX
Prostate	886 NX
Skin	628 NX
Testis	132 NX
Kidney	50 NX
Lung	23 NX
Pancreas	12 NX

Melanocytes	137 NX
Skin	137 NX

Mixed cell types	NX
Pancreas	NX

Mixed immune cells	NX
Heart muscle	NX

Monocytes	0 NX
Pancreas	0 NX

Mucus-secreting cells	12 NX
Colon	76 NX
Rectum	16 NX
Small intestine	4 NX

Muller glia cells	1 NX
Eye	1 NX

Pancreatic endocrine cells	1 NX
Pancreas	1 NX

Paneth cells	3 NX
Rectum	4 NX
Colon	3 NX
Small intestine	0 NX

Peritubular cells	2 NX
Testis	2 NX

Proximal tubular cells	1 NX
Kidney	1 NX

Rod photoreceptor cells	3 NX
Eye	3 NX

Sertoli cells	0 NX
Testis	0 NX

Smooth muscle cells	35 NX
Skin	50 NX
Prostate	35 NX
Heart muscle	15 NX
Pancreas	6 NX

Spermatocytes	1 NX
Testis	1 NX

Spermatogonia	4 NX
Testis	4 NX

Suprabasal keratinocytes	96 NX
Skin	96 NX

Syncytiotrophoblasts	1 NX
Placenta	1 NX

T-cells	346 NX
Skin	1162 NX
Prostate	710 NX
Colon	404 NX
Liver	291 NX
Kidney	243 NX
Lung	35 NX

Undifferentiated cells	22 NX
Colon	98 NX
Rectum	19 NX
Small intestine	17 NX

Urothelial cells	29 NX
Prostate	29 NX

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.