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UROTHELIAL CANCER - Interactive survival scatter ploti
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
: Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A 5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A 5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as median FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average FPKM
1030.0
Number of samples
406
Samples
Sample
Description
FPKM
TCGA-CF-A8HY-01A
59 years, male, asian, stage:ii, alive, 345 days
3339.6
TCGA-E7-A519-01A
72 years, male, white, stage:ii, alive, 508 days
2901.3
TCGA-CF-A5UA-01A
67 years, male, asian, stage:ii, alive, 365 days
2796.9
TCGA-E7-A8O8-01A
59 years, male, asian, stage:ii, alive, 13 days
2770.5
TCGA-GC-A6I3-01A
90 years, female, black or african american, stage:iv, alive, 423 days
2718.3
TCGA-GU-A763-01A
72 years, male, white, stage:iii, alive, 997 days
2631.3
TCGA-KQ-A41O-01A
84 years, male, stage:iv, alive, 1538 days
2536.3
TCGA-S5-AA26-01A
46 years, male, black or african american, stage:iii, alive, 503 days
2334.8
TCGA-S5-A6DX-01A
83 years, male, white, stage:iv, dead, 56 days
2320.8
TCGA-G2-A2EO-01A
69 years, male, white, stage:iii, dead, 1804 days
2268.1
TCGA-DK-AA75-01A
82 years, male, white, stage:iii, dead, 340 days
2250.1
TCGA-UY-A8OD-01A
67 years, female, black or african american, stage:ii, alive, 3432 days
2080.8
TCGA-CF-A47T-01A
58 years, female, asian, stage:ii, dead, 385 days
2064.0
TCGA-E7-A678-01A
55 years, male, asian, stage:iii, alive, 798 days
2052.2
TCGA-XF-A8HB-01A
50 years, female, stage:ii, alive, 1370 days
2050.9
TCGA-FD-A43S-01A
71 years, female, white, stage:iii, alive, 455 days
2029.2
TCGA-XF-A9T0-01A
69 years, male, white, stage:iii, alive, 799 days
2007.6
TCGA-CF-A47W-01A
42 years, male, asian, stage:ii, alive, 368 days
1985.9
TCGA-BT-A0S7-01A
75 years, male, white, stage:iii, dead, 200 days
1946.8
TCGA-E7-A7DU-01A
73 years, male, white, stage:iii, alive, 28 days
1945.5
TCGA-FD-A43X-01A
84 years, male, white, stage:ii, alive, 110 days
1927.6
TCGA-FD-A3SJ-01A
59 years, male, white, stage:iv, dead, 739 days
1879.6
TCGA-DK-AA71-01A
71 years, male, white, stage:ii, alive, 415 days
1876.5
TCGA-FJ-A3ZF-01A
73 years, male, white, stage:iii, alive, 524 days
1845.1
TCGA-DK-A6B0-01A
61 years, male, white, stage:ii, alive, 2330 days
1813.5
TCGA-KQ-A41P-01A
76 years, male, white, stage:iv, alive, 1094 days
1792.4
TCGA-FD-A5BT-01A
84 years, male, white, stage:iii, dead, 328 days
1789.6
TCGA-XF-A9SU-01A
74 years, female, white, stage:iv, dead, 182 days
1748.3
TCGA-UY-A9PE-01A
87 years, male, white, stage:iv, alive, 189 days
1745.8
TCGA-ZF-A9R5-01A
59 years, male, white, stage:iii, alive, 1090 days
1734.6
TCGA-4Z-AA84-01A
61 years, male, white, stage:iv, alive, 460 days
1732.8
TCGA-XF-AAMH-01A
80 years, male, white, stage:iv, dead, 344 days
1718.2
TCGA-XF-AAMZ-01A
81 years, female, white, stage:iv, dead, 1348 days
1716.9
TCGA-G2-A3IE-01A
52 years, male, white, stage:ii, dead, 612 days
1708.8
TCGA-ZF-AA51-01A
69 years, female, white, stage:ii, alive, 1714 days
1707.5
TCGA-CF-A5U8-01A
59 years, male, asian, stage:ii, alive, 399 days
1696.2
TCGA-DK-A3WY-01A
67 years, female, white, stage:iii, alive, 4967 days
1694.4
TCGA-GD-A6C6-01A
64 years, male, white, stage:iii, alive, 67 days
1689.1
TCGA-UY-A78O-01A
74 years, female, white, stage:ii, alive, 2312 days
1680.7
TCGA-GU-A767-01A
81 years, male, white, stage:iv, dead, 144 days
1670.6
TCGA-YF-AA3L-01A
47 years, female, stage:ii, alive, 364 days
1653.7
TCGA-DK-A3X2-01A
85 years, male, white, stage:iv, dead, 547 days
1638.6
TCGA-XF-A8HF-01A
80 years, male, white, stage:iii, dead, 2954 days
1638.3
TCGA-DK-A2I1-01A
73 years, female, white, stage:ii, alive, 546 days
1637.5
TCGA-XF-AAN1-01A
75 years, female, stage:iii, dead, 941 days
1631.8
TCGA-FD-A43U-01A
70 years, male, white, stage:iv, alive, 636 days
1628.5
TCGA-XF-A9T2-01A
54 years, male, white, stage:iii, dead, 575 days
1626.3
TCGA-DK-A1AD-01A
69 years, male, white, stage:iv, alive, 3420 days
1595.0
TCGA-E7-A3Y1-01A
57 years, male, white, stage:ii, alive, 163 days
1541.6
TCGA-BT-A42F-01A
64 years, male, white, stage:iv, alive, 864 days
1503.7
TCGA-UY-A78M-01A
81 years, female, asian, stage:iv, dead, 690 days
1503.2
TCGA-4Z-AA87-01A
72 years, male, black or african american, stage:iii, alive, 1454 days
1501.6
TCGA-DK-A3WW-01A
57 years, male, white, stage:iii, alive, 633 days
1471.9
TCGA-GD-A3OS-01A
54 years, female, white, stage:ii, alive, 638 days
1471.9
TCGA-C4-A0F0-01A
60 years, male, stage:ii, alive, 59 days
1450.5
TCGA-E5-A4U1-01A
72 years, male, stage:ii, alive, 1181 days
1441.3
TCGA-YC-A9TC-01A
72 years, male, white, stage:iv, dead, 20 days
1438.1
TCGA-XF-AAMQ-01A
59 years, female, white, stage:ii, alive, 2177 days
1437.0
TCGA-BT-A20J-01A
75 years, male, white, stage:ii, dead, 579 days
1429.4
TCGA-CF-A47S-01A
41 years, male, asian, stage:ii, alive, 333 days
1427.3
TCGA-4Z-AA81-01A
80 years, male, white, stage:ii, dead, 1270 days
1422.3
TCGA-BT-A42E-01A
74 years, male, white, stage:iii, alive, 1108 days
1418.8
TCGA-DK-A6AW-01A
70 years, male, white, stage:ii, alive, 1621 days
1410.1
TCGA-KQ-A41Q-01A
89 years, male, white, stage:iii, alive, 1429 days
1399.8
TCGA-CF-A27C-01A
52 years, male, asian, stage:iii, alive, 425 days
1394.3
TCGA-BT-A2LA-01A
54 years, male, white, stage:iii, alive, 522 days
1388.6
TCGA-BT-A20T-01A
63 years, male, white, stage:iv, dead, 453 days
1387.5
TCGA-DK-A1A3-01A
60 years, male, white, stage:iv, dead, 665 days
1384.4
TCGA-FD-A5BS-01A
68 years, male, white, stage:iii, alive, 1639 days
1384.3
TCGA-GV-A3JV-01A
66 years, male, white, stage:iv, dead, 434 days
1380.1
TCGA-4Z-AA89-01A
61 years, male, white, stage:iv, alive, 902 days
1351.3
TCGA-DK-AA6U-01A
64 years, male, white, stage:ii, alive, 578 days
1334.7
TCGA-DK-A1AC-01A
72 years, male, white, stage:iii, alive, 3981 days
1324.7
TCGA-GV-A6ZA-01A
54 years, male, white, stage:ii, alive, 691 days
1317.9
TCGA-ZF-A9RN-01A
67 years, female, white, stage:iii, dead, 615 days
1316.4
TCGA-DK-AA6T-01A
63 years, male, white, stage:ii, alive, 572 days
1311.1
TCGA-DK-AA76-01A
64 years, female, white, stage:ii, alive, 366 days
1309.4
TCGA-XF-AAN3-01A
76 years, male, white, stage:iv, alive, 2625 days
1293.1
TCGA-CF-A3MI-01A
62 years, male, asian, stage:ii, alive, 370 days
1291.3
TCGA-UY-A9PD-01A
81 years, male, white, stage:iii, alive, 542 days
1289.0
TCGA-CF-A47Y-01A
55 years, male, asian, stage:ii, alive, 373 days
1275.8
TCGA-DK-A6AV-01A
82 years, female, asian, stage:ii, alive, 1952 days
1268.0
TCGA-ZF-A9R4-01A
83 years, male, white, stage:ii, alive, 921 days
1267.4
TCGA-G2-A2EF-01A
50 years, male, white, stage:ii, alive, 1884 days
1259.6
TCGA-BT-A2LB-01A
73 years, female, white, stage:iii, dead, 492 days
1246.4
TCGA-G2-AA3B-01A
75 years, female, white, stage:ii, alive, 2008 days
1243.8
TCGA-XF-AAN8-01A
74 years, female, white, stage:iii, dead, 118 days
1240.3
TCGA-XF-A9SL-01A
69 years, male, white, stage:iv, dead, 2020 days
1239.2
TCGA-K4-AAQO-01A
56 years, male, white, stage:iii, alive, 359 days
1236.7
TCGA-DK-A3IL-01A
79 years, female, white, stage:iv, dead, 413 days
1235.4
TCGA-DK-A1A7-01A
67 years, female, white, stage:iv, alive, 560 days
1229.2
TCGA-XF-A9SK-01A
65 years, male, white, stage:iv, dead, 486 days
1227.7
TCGA-BT-A20P-01A
81 years, female, white, stage:iii, dead, 544 days
1226.8
TCGA-G2-A2EC-01A
58 years, female, black or african american, stage:ii, dead, 696 days
1216.6
TCGA-FD-A5BR-01A
57 years, male, white, stage:ii, alive, 813 days
1216.2
TCGA-CF-A3MH-01A
75 years, male, asian, stage:ii, alive, 398 days
1211.4
TCGA-GU-AATO-01A
75 years, male, white, stage:iv, dead, 324 days
1209.7
TCGA-LT-A8JT-01A
69 years, female, white, stage:ii, alive, 641 days
1198.4
TCGA-GU-A42R-01A
68 years, male, white, stage:iv, dead, 577 days
1188.7
TCGA-DK-AA77-01A
61 years, male, white, stage:ii, alive, 618 days
1188.4
TCGA-DK-A1AG-01A
66 years, male, white, stage:iii, alive, 475 days
1184.5
TCGA-ZF-AA4U-01A
70 years, male, white, stage:iii, dead, 262 days
1183.5
TCGA-FD-A6TH-01A
63 years, male, white, stage:iv, dead, 131 days
1183.4
TCGA-E7-A4XJ-01A
66 years, male, asian, stage:ii, dead, 68 days
1182.8
TCGA-XF-AAN7-01A
60 years, male, white, stage:iv, dead, 565 days
1182.0
TCGA-XF-A8HC-01A
79 years, male, asian, stage:iv, dead, 200 days
1181.2
TCGA-XF-AAN0-01A
68 years, male, white, stage:iv, dead, 1718 days
1179.3
TCGA-5N-A9KM-01A
73 years, female, white, stage:iii, dead, 530 days
1175.9
TCGA-C4-A0F6-01A
82 years, female, stage:iii, alive, 700 days
1173.1
TCGA-GV-A3QF-01A
79 years, male, white, stage:iv, dead, 617 days
1172.4
TCGA-FJ-A871-01A
49 years, male, white, stage:iii, dead, 272 days
1167.2
TCGA-ZF-A9R9-01A
58 years, male, white, stage:iv, dead, 864 days
1164.4
TCGA-XF-A9SP-01A
59 years, male, white, stage:iii, dead, 454 days
1162.4
TCGA-4Z-AA7Q-01A
79 years, male, white, stage:iii, dead, 510 days
1161.6
TCGA-DK-A3IS-01A
68 years, male, white, stage:ii, alive, 1529 days
1155.3
TCGA-YC-A89H-01A
78 years, female, white, stage:ii, alive, 573 days
1153.1
TCGA-ZF-AA4V-01A
66 years, male, white, stage:iii, alive, 1806 days
1149.9
TCGA-FD-A43Y-01A
65 years, male, white, stage:iii, dead, 474 days
1148.2
TCGA-ZF-AA5N-01A
62 years, female, white, stage:iv, dead, 168 days
1148.1
TCGA-GC-A6I1-01A
90 years, female, white, stage:ii, dead, 272 days
1148.1
TCGA-KQ-A41R-01A
80 years, female, white, stage:ii, alive, 1350 days
1141.1
TCGA-FD-A5BX-01A
82 years, male, white, stage:iv, dead, 173 days
1140.9
TCGA-XF-AAN5-01A
61 years, female, white, stage:iii, alive, 2293 days
1137.9
TCGA-E7-A5KF-01A
67 years, male, asian, stage:ii, alive, 20 days
1137.4
TCGA-SY-A9G0-01A
82 years, male, white, stage:iv, dead, 1008 days
1136.2
TCGA-FD-A5BY-01A
63 years, female, white, stage:iii, alive, 251 days
1130.5
TCGA-DK-A2I6-01A
81 years, male, white, stage:iv, alive, 2656 days
1129.1
TCGA-FT-A3EE-01A
80 years, female, white, stage:iii, dead, 99 days
1127.0
TCGA-E7-A5KE-01A
78 years, female, asian, stage:ii, alive, 17 days
1123.7
TCGA-FD-A3SN-01A
79 years, male, white, stage:iii, alive, 887 days
1119.7
TCGA-E7-A4IJ-01A
56 years, male, asian, stage:ii, dead, 674 days
1118.0
TCGA-H4-A2HQ-01A
64 years, female, black or african american, stage:iv, alive, 590 days
1114.1
TCGA-XF-A9SH-01A
65 years, female, asian, stage:ii, dead, 1971 days
1111.3
TCGA-UY-A8OC-01A
90 years, male, white, stage:iv, dead, 92 days
1110.5
TCGA-GC-A3BM-01A
70 years, male, white, stage:ii, dead, 651 days
1110.0
TCGA-ZF-A9R2-01A
75 years, male, white, stage:ii, alive, 642 days
1106.5
TCGA-YC-A8S6-01A
71 years, male, white, stage:ii, alive, 293 days
1103.0
TCGA-DK-AA74-01A
75 years, male, white, stage:iii, alive, 1708 days
1103.0
TCGA-UY-A78N-01A
79 years, male, white, stage:iv, dead, 2641 days
1102.4
TCGA-FJ-A3Z7-01A
76 years, male, white, stage:iv, alive, 945 days
1100.5
TCGA-K4-A83P-01A
77 years, male, white, stage:iv, alive, 495 days
1099.8
TCGA-G2-A2EL-01A
77 years, male, white, stage:ii, dead, 819 days
1099.6
TCGA-DK-AA6L-01A
48 years, male, white, stage:iv, dead, 1163 days
1096.1
TCGA-C4-A0EZ-01A
69 years, female, stage:iv, dead, 273 days
1095.0
TCGA-UY-A8OB-01A
64 years, male, white, stage:iv, alive, 2109 days
1094.3
TCGA-HQ-A2OE-01A
male, alive, 1174 days
1089.2
TCGA-DK-A1AE-01A
84 years, male, white, stage:iii, alive, 491 days
1088.9
TCGA-DK-A1AA-01A
57 years, male, white, stage:iii, alive, 578 days
1088.4
TCGA-BT-A20W-01A
71 years, male, white, stage:ii, dead, 254 days
1087.0
TCGA-E7-A85H-01A
64 years, male, asian, stage:iii, alive, 394 days
1084.5
TCGA-BT-A20X-01A
56 years, male, white, stage:iv, dead, 251 days
1080.3
TCGA-XF-A9SV-01A
82 years, male, white, stage:iv, dead, 388 days
1080.1
TCGA-GC-A3RD-01A
83 years, female, white, stage:iii, alive, 428 days
1078.7
TCGA-FJ-A3ZE-01A
65 years, male, white, stage:iv, dead, 324 days
1078.2
TCGA-GD-A2C5-01A
53 years, female, white, stage:iv, alive, 812 days
1077.0
TCGA-CF-A9FL-01A
85 years, male, asian, stage:iii, dead, 565 days
1071.4
TCGA-FD-A62O-01A
74 years, male, white, stage:iv, dead, 216 days
1061.9
TCGA-G2-A2ES-01A
85 years, male, white, stage:ii, dead, 1004 days
1061.3
TCGA-CF-A3MG-01A
48 years, male, asian, stage:ii, alive, 369 days
1058.5
TCGA-H4-A2HO-01A
53 years, male, white, stage:iii, alive, 46 days
1055.4
TCGA-DK-A3X1-01A
78 years, female, white, stage:iii, alive, 2009 days
1053.8
TCGA-GV-A3JZ-01A
55 years, male, white, stage:iv, alive, 603 days
1050.5
TCGA-4Z-AA7O-01A
64 years, male, black or african american, stage:ii, alive, 512 days
1047.4
TCGA-G2-AA3C-01A
66 years, male, white, stage:iv, dead, 211 days
1045.7
TCGA-CU-A72E-01A
76 years, male, white, stage:iv, dead, 413 days
1045.3
TCGA-GU-AATQ-01A
69 years, male, white, stage:iii, dead, 213 days
1043.2
TCGA-DK-AA6W-01A
79 years, male, white, stage:ii, dead, 415 days
1041.6
TCGA-CU-A3YL-01A
67 years, male, white, stage:iii, alive, 906 days
1040.4
TCGA-E7-A6ME-01A
75 years, male, asian, stage:ii, alive, 731 days
1033.1
TCGA-XF-AAMG-01A
49 years, male, white, stage:iii, alive, 3364 days
1029.8
TCGA-GD-A76B-01A
86 years, female, white, stage:ii, dead, 224 days
1022.7
TCGA-2F-A9KR-01A
59 years, female, stage:iii, dead, 3183 days
1020.3
TCGA-2F-A9KT-01A
83 years, male, white, stage:ii, alive, 3314 days
1015.6
TCGA-4Z-AA7W-01A
55 years, male, white, stage:ii, alive, 840 days
1015.6
TCGA-CF-A47V-01A
52 years, male, asian, stage:ii, alive, 379 days
1012.7
TCGA-DK-A1AB-01A
74 years, female, white, stage:iv, dead, 508 days
1009.6
TCGA-E7-A6MF-01A
37 years, male, asian, stage:ii, alive, 750 days
1009.1
TCGA-KQ-A41N-01A
73 years, male, black or african american, stage:iii, alive, 1604 days
1006.2
TCGA-CF-A8HX-01A
55 years, female, asian, stage:ii, alive, 345 days
1006.2
TCGA-FD-A6TB-01A
82 years, male, white, stage:iii, alive, 572 days
1005.3
TCGA-GU-AATP-01A
74 years, male, white, stage:iv, alive, 1003 days
1004.1
TCGA-CF-A7I0-01A
54 years, male, asian, stage:ii, alive, 368 days
1003.3
TCGA-GV-A3QH-01A
67 years, male, white, stage:ii, dead, 258 days
999.1
TCGA-E7-A6MD-01A
66 years, male, white, stage:iv, alive, 129 days
999.0
TCGA-DK-AA6P-01A
72 years, female, white, stage:ii, alive, 457 days
997.6
TCGA-ZF-A9RL-01A
61 years, male, white, stage:ii, alive, 2703 days
989.9
TCGA-UY-A78P-01A
78 years, female, white, stage:ii, alive, 2380 days
986.0
TCGA-CF-A47X-01A
60 years, male, asian, stage:ii, alive, 384 days
985.7
TCGA-G2-A3VY-01A
66 years, male, asian, stage:ii, alive, 536 days
985.7
TCGA-BT-A20R-01A
79 years, female, white, stage:iv, dead, 154 days
984.7
TCGA-UY-A78K-01A
60 years, male, white, stage:iv, dead, 536 days
984.3
TCGA-XF-A8HG-01A
69 years, male, white, stage:iii, dead, 467 days
982.6
TCGA-4Z-AA7R-01A
73 years, male, black or african american, stage:iv, dead, 522 days
980.7
TCGA-GC-A3YS-01A
61 years, male, white, stage:iv, alive, 758 days
976.6
TCGA-XF-A9ST-01A
68 years, male, white, stage:iii, dead, 128 days
976.5
TCGA-K4-A4AB-01B
76 years, male, white, stage:iii, alive, 84 days
976.4
TCGA-FD-A3B4-01A
55 years, female, black or african american, stage:iii, dead, 510 days
976.4
TCGA-E7-A7PW-01A
63 years, male, asian, stage:iii, alive, 416 days
974.8
TCGA-ZF-AA52-01A
70 years, male, white, stage:iii, dead, 1077 days
968.5
TCGA-XF-A9SI-01A
73 years, female, asian, stage:ii, alive, 2423 days
967.3
TCGA-FD-A3B5-01A
86 years, male, black or african american, stage:iv, dead, 272 days
962.3
TCGA-2F-A9KP-01A
66 years, male, white, stage:iv, dead, 364 days
958.9
TCGA-FD-A6TG-01A
73 years, male, white, stage:iv, dead, 93 days
958.7
TCGA-4Z-AA83-01A
52 years, male, white, stage:ii, alive, 2024 days
956.6
TCGA-4Z-AA7N-01A
66 years, male, white, stage:iii, dead, 1367 days
956.1
TCGA-K4-A54R-01A
59 years, male, white, stage:ii, alive, 842 days
952.7
TCGA-DK-A3IU-01A
58 years, male, white, stage:ii, dead, 706 days
949.8
TCGA-GC-A3RB-01A
54 years, male, white, stage:iii, alive, 582 days
949.1
TCGA-DK-AA6Q-01A
61 years, female, white, stage:iv, dead, 413 days
947.0
TCGA-CF-A9FF-01A
52 years, male, asian, stage:ii, alive, 361 days
943.0
TCGA-XF-A9SJ-01A
83 years, male, white, stage:iv, dead, 98 days
941.1
TCGA-E7-A541-01A
66 years, male, white, stage:ii, dead, 778 days
940.4
TCGA-PQ-A6FN-01A
78 years, female, white, stage:iii, alive, 507 days
939.9
TCGA-DK-AA6M-01A
64 years, female, white, stage:ii, alive, 1582 days
938.5
TCGA-BL-A13J-01A
65 years, male, white, stage:iv, dead, 81 days
938.2
TCGA-DK-A6B6-01A
57 years, male, white, stage:ii, alive, 1115 days
935.3
TCGA-ZF-AA4N-01A
74 years, male, white, stage:ii, dead, 88 days
933.5
TCGA-4Z-AA7S-01A
66 years, male, black or african american, stage:iii, dead, 1064 days
931.8
TCGA-FD-A5BV-01A
47 years, female, white, stage:iii, dead, 163 days
929.4
TCGA-BT-A20V-01A
59 years, female, black or african american, stage:iv, dead, 154 days
926.3
TCGA-GV-A40G-01A
77 years, male, white, stage:ii, alive, 580 days
923.5
TCGA-C4-A0F1-01A
71 years, male, stage:iii, alive, 89 days
923.4
TCGA-ZF-A9R0-01A
82 years, male, white, stage:iii, dead, 680 days
918.6
TCGA-FD-A6TF-01A
80 years, female, white, stage:iv, dead, 69 days
918.1
TCGA-XF-A9T5-01A
78 years, female, white, stage:iv, alive, 2027 days
917.7
TCGA-ZF-AA54-01A
71 years, male, white, stage:iii, dead, 590 days
913.8
TCGA-FD-A6TD-01A
77 years, male, white, stage:iii, dead, 386 days
908.8
TCGA-FD-A62N-01A
69 years, male, asian, stage:iii, alive, 82 days
908.4
TCGA-UY-A9PH-01A
73 years, male, white, stage:ii, alive, 1561 days
908.3
TCGA-FJ-A3Z9-01A
72 years, male, white, dead, 385 days
896.1
TCGA-BT-A20N-01A
72 years, male, stage:iii, dead, 795 days
895.9
TCGA-GV-A3JW-01A
74 years, male, white, stage:ii, alive, 649 days
892.4
TCGA-ZF-A9RD-01A
75 years, female, white, stage:iv, dead, 408 days
891.2
TCGA-CU-A0YO-01A
84 years, male, white, stage:iv, dead, 149 days
889.3
TCGA-K4-A3WS-01A
66 years, male, white, stage:iii, alive, 761 days
888.2
TCGA-FD-A43N-01A
76 years, male, white, stage:iii, alive, 230 days
886.9
TCGA-HQ-A2OF-01A
52 years, female, stage:iii, alive, 1947 days
886.0
TCGA-FD-A6TA-01A
58 years, male, white, stage:iv, alive, 1912 days
885.4
TCGA-GU-A42Q-01A
67 years, male, white, stage:iii, dead, 344 days
882.4
TCGA-ZF-A9R7-01A
76 years, female, white, stage:ii, alive, 665 days
877.2
TCGA-4Z-AA80-01A
73 years, male, white, stage:ii, dead, 19 days
872.9
TCGA-K4-A3WU-01B
88 years, male, white, stage:iii, alive, 105 days
870.7
TCGA-GD-A3OQ-01A
48 years, male, white, stage:iv, alive, 95 days
866.2
TCGA-XF-A9T3-01A
69 years, female, white, stage:iv, alive, 68 days
865.2
TCGA-GU-A762-01A
87 years, male, white, stage:iv, dead, 232 days
864.9
TCGA-XF-AAMJ-01A
70 years, male, asian, stage:iii, dead, 1670 days
861.7
TCGA-DK-A6B1-01A
67 years, male, white, stage:ii, alive, 2049 days
859.7
TCGA-FD-A3SL-01A
60 years, male, white, stage:iv, dead, 712 days
855.7
TCGA-ZF-A9RC-01A
77 years, male, white, stage:iii, alive, 2868 days
851.3
TCGA-DK-A3IK-01A
87 years, male, white, stage:iv, dead, 146 days
850.9
TCGA-CF-A9FM-01A
50 years, male, asian, stage:i, alive, 398 days
849.6
TCGA-BL-A3JM-01A
63 years, male, white, stage:iii, dead, 205 days
846.6
TCGA-XF-AAN2-01A
73 years, male, white, stage:ii, dead, 1869 days
845.2
TCGA-4Z-AA7M-01A
65 years, male, white, stage:iii, alive, 495 days
834.4
TCGA-ZF-AA4W-01A
56 years, male, white, stage:iii, alive, 1830 days
829.2
TCGA-GU-A42P-01A
72 years, male, white, stage:iv, dead, 332 days
827.9
TCGA-ZF-AA56-01A
79 years, female, white, stage:iii, dead, 259 days
827.3
TCGA-BL-A13I-01A
57 years, female, white, stage:iii, dead, 223 days
826.1
TCGA-DK-AA6S-01A
60 years, male, white, stage:iii, alive, 5050 days
825.9
TCGA-2F-A9KO-01A
63 years, male, white, stage:iv, dead, 734 days
822.0
TCGA-GV-A3QK-01B
56 years, female, white, stage:iv, alive, 832 days
816.9
TCGA-E7-A8O7-01A
52 years, male, asian, stage:ii, alive, 466 days
816.4
TCGA-XF-AAME-01A
64 years, female, white, stage:ii, dead, 2828 days
814.1
TCGA-FD-A5BZ-01A
77 years, female, white, stage:iv, dead, 835 days
813.9
TCGA-DK-A2I2-01A
63 years, female, white, stage:iv, dead, 237 days
808.1
TCGA-ZF-AA4T-01A
65 years, male, white, stage:iv, dead, 599 days
806.6
TCGA-UY-A9PF-01A
78 years, male, white, stage:iv, alive, 117 days
805.9
TCGA-E5-A4TZ-01A
64 years, male, white, stage:iv, dead, 467 days
805.2
TCGA-XF-A8HE-01A
47 years, male, white, stage:iii, alive, 3817 days
798.1
TCGA-UY-A78L-01A
62 years, male, white, stage:iv, alive, 1127 days
795.4
TCGA-DK-A2I4-01A
79 years, male, white, stage:iii, alive, 4343 days
792.1
TCGA-ZF-AA5P-01A
65 years, male, white, stage:iv, alive, 372 days
791.4
TCGA-XF-A9SW-01A
85 years, male, white, stage:iv, dead, 362 days
790.4
TCGA-XF-A8HI-01A
57 years, female, white, stage:iv, dead, 544 days
787.2
TCGA-CF-A1HR-01A
62 years, male, asian, stage:iii, alive, 389 days
787.2
TCGA-4Z-AA82-01A
59 years, male, black or african american, stage:iv, dead, 1556 days
784.8
TCGA-E7-A7DV-01A
44 years, male, white, stage:iv, alive, 37 days
780.6
TCGA-DK-A6B2-01A
70 years, male, white, stage:iv, alive, 477 days
776.7
TCGA-E5-A2PC-01A
61 years, female, white, stage:iv, alive, 1326 days
774.2
TCGA-DK-A1A6-01A
53 years, male, white, stage:iv, alive, 2020 days
773.3
TCGA-FD-A3SS-01A
66 years, male, white, stage:iv, dead, 391 days
770.0
TCGA-XF-A9T8-01A
64 years, male, white, stage:iii, dead, 418 days
767.3
TCGA-BT-A20U-01A
70 years, female, white, stage:iii, dead, 455 days
764.6
TCGA-E7-A7XN-01A
67 years, male, asian, stage:iii, alive, 428 days
763.4
TCGA-K4-A5RI-01A
67 years, female, white, stage:iii, dead, 356 days
760.7
TCGA-CU-A5W6-01A
70 years, male, white, stage:iii, dead, 56 days
755.8
TCGA-GC-A3WC-01A
80 years, female, white, stage:iii, alive, 540 days
743.5
TCGA-YF-AA3M-01A
57 years, male, stage:ii, alive, 415 days
743.4
TCGA-XF-AAMX-01A
87 years, female, black or african american, stage:iii, dead, 206 days
737.2
TCGA-GC-A3OO-01A
79 years, male, white, stage:ii, alive, 481 days
735.2
TCGA-G2-AA3D-01A
60 years, male, white, stage:iv, alive, 2139 days
733.2
TCGA-2F-A9KW-01A
67 years, female, white, stage:iii, dead, 254 days
730.7
TCGA-FD-A5C0-01A
61 years, male, white, stage:iv, dead, 550 days
730.6
TCGA-FD-A43P-01A
74 years, male, black or african american, stage:ii, alive, 832 days
730.4
TCGA-G2-A2EK-01A
57 years, male, white, stage:ii, alive, 485 days
728.9
TCGA-UY-A9PB-01A
49 years, male, white, stage:iii, alive, 899 days
722.3
TCGA-XF-A9SM-01A
76 years, male, white, stage:iii, alive, 1048 days
721.3
TCGA-CU-A0YR-01A
84 years, male, white, stage:iv, dead, 460 days
718.6
TCGA-FT-A61P-01A
76 years, male, white, stage:iv, alive, 337 days
718.5
TCGA-FD-A3N6-01A
43 years, female, black or african american, stage:ii, alive, 851 days
717.5
TCGA-CF-A1HS-01A
75 years, female, asian, stage:iii, alive, 382 days
717.0
TCGA-SY-A9G5-01A
66 years, male, white, stage:iii, alive, 1186 days
715.5
TCGA-XF-AAN4-01A
77 years, female, white, stage:iii, dead, 823 days
713.1
TCGA-DK-A3IM-01A
77 years, male, white, stage:iii, dead, 248 days
706.1
TCGA-GD-A3OP-01A
84 years, female, white, stage:iv, alive, 64 days
704.6
TCGA-FD-A3B6-01A
75 years, male, white, stage:ii, dead, 1005 days
704.2
TCGA-XF-A9SX-01A
63 years, female, white, stage:iv, dead, 719 days
702.1
TCGA-ZF-A9RF-01A
74 years, male, white, stage:ii, alive, 1949 days
701.5
TCGA-2F-A9KQ-01A
69 years, male, white, stage:iii, alive, 2886 days
698.9
TCGA-BT-A42C-01A
64 years, male, white, stage:ii, alive, 873 days
695.3
TCGA-BT-A20O-01A
75 years, male, white, stage:iii, dead, 370 days
691.8
TCGA-FD-A3B3-01A
74 years, female, white, stage:iii, dead, 974 days
689.7
TCGA-E7-A3X6-01A
70 years, male, white, stage:ii, dead, 904 days
688.0
TCGA-GU-A766-01A
62 years, male, white, stage:ii, alive, 480 days
685.5
TCGA-KQ-A41S-01A
87 years, female, white, stage:iii, alive, 35 days
682.0
TCGA-BT-A20Q-01A
73 years, male, white, stage:iv, dead, 593 days
679.5
TCGA-HQ-A5ND-01A
78 years, male, stage:iv, dead, 274 days
676.7
TCGA-FD-A5C1-01A
61 years, female, white, stage:iii, alive, 1792 days
675.6
TCGA-FD-A3SQ-01A
62 years, male, white, stage:iv, dead, 1423 days
668.1
TCGA-E7-A677-01A
81 years, male, asian, stage:ii, alive, 820 days
668.1
TCGA-BL-A5ZZ-01A
80 years, female, white, stage:iii, alive, 377 days
664.5
TCGA-DK-A3IQ-01A
74 years, male, white, stage:iii, dead, 539 days
659.1
TCGA-CU-A3KJ-01A
75 years, male, white, stage:iii, alive, 562 days
658.9
TCGA-FD-A5BU-01A
76 years, female, black or african american, stage:ii, alive, 588 days
657.8
TCGA-ZF-A9RE-01A
78 years, female, white, stage:ii, dead, 106 days
657.6
TCGA-CU-A3QU-01A
58 years, male, white, stage:iv, alive, 158 days
657.0
TCGA-K4-A4AC-01A
83 years, male, white, stage:ii, dead, 278 days
652.7
TCGA-DK-A1AF-01A
84 years, female, white, stage:iv, alive, 536 days
642.2
TCGA-XF-A8HH-01A
61 years, female, white, stage:iv, dead, 57 days
642.1
TCGA-ZF-AA4R-01A
67 years, male, white, stage:iv, dead, 1036 days
641.4
TCGA-UY-A9PA-01A
48 years, male, white, stage:iii, alive, 119 days
641.3
TCGA-BT-A3PH-01A
76 years, male, white, stage:iv, dead, 142 days
640.8
TCGA-DK-A3IN-01A
72 years, male, white, stage:iii, dead, 250 days
635.7
TCGA-E7-A97P-01A
73 years, male, asian, stage:ii, dead, 437 days
631.7
TCGA-ZF-AA53-01A
60 years, male, white, stage:ii, alive, 1761 days
631.5
TCGA-ZF-AA58-01A
61 years, female, white, stage:iv, alive, 1649 days
629.9
TCGA-BT-A3PJ-01A
76 years, male, white, stage:iii, alive, 789 days
626.9
TCGA-G2-A3IB-01A
66 years, male, black or african american, stage:ii, dead, 220 days
626.2
TCGA-K4-A6FZ-01A
75 years, female, white, stage:iii, alive, 55 days
626.0
TCGA-FD-A6TK-01A
60 years, male, white, stage:iii, alive, 330 days
618.8
TCGA-FD-A3NA-01A
60 years, male, white, stage:ii, alive, 1845 days
618.7
TCGA-BL-A0C8-01A
73 years, male, white, stage:i, alive, 1219 days
613.9
TCGA-ZF-A9R1-01A
81 years, male, white, stage:iv, alive, 773 days
612.1
TCGA-FD-A6TC-01A
79 years, female, white, stage:iii, alive, 187 days
611.0
TCGA-5N-A9KI-01A
76 years, female, white, stage:iii, dead, 76 days
609.9
TCGA-PQ-A6FI-01A
70 years, male, white, stage:ii, alive, 372 days
608.3
TCGA-GV-A3JX-01A
59 years, male, white, stage:iii, alive, 581 days
606.3
TCGA-XF-AAMT-01A
75 years, female, white, stage:iv, dead, 90 days
600.8
TCGA-XF-A9SY-01A
60 years, female, white, stage:iv, alive, 640 days
599.5
TCGA-G2-A2EJ-01A
56 years, female, white, stage:ii, alive, 1460 days
599.2
TCGA-GC-A3RC-01A
59 years, male, white, stage:ii, alive, 484 days
594.8
TCGA-XF-AAMW-01A
79 years, female, white, stage:iv, dead, 253 days
594.0
TCGA-GV-A3QI-01A
47 years, male, white, stage:iii, alive, 1110 days
593.2
TCGA-XF-A9T6-01A
88 years, female, white, stage:iii, alive, 64 days
592.3
TCGA-E7-A97Q-01A
60 years, female, white, stage:iv, dead, 246 days
581.9
TCGA-XF-A9T4-01A
48 years, male, white, stage:iv, dead, 495 days
580.0
TCGA-FD-A3SM-01A
70 years, male, white, stage:iv, dead, 547 days
575.1
TCGA-DK-A1A5-01A
79 years, male, white, stage:ii, dead, 65 days
574.2
TCGA-FD-A3B8-01A
56 years, male, white, stage:ii, alive, 384 days
567.5
TCGA-FD-A6TE-01A
54 years, male, white, stage:iv, alive, 376 days
565.9
TCGA-XF-AAML-01A
75 years, male, white, stage:ii, dead, 232 days
558.0
TCGA-4Z-AA86-01A
67 years, male, black or african american, stage:iv, dead, 311 days
552.4
TCGA-XF-A8HD-01A
77 years, male, white, stage:iii, alive, 2964 days
552.3
TCGA-ZF-A9R3-01A
53 years, female, white, stage:ii, dead, 949 days
551.4
TCGA-G2-AA3F-01A
77 years, male, white, stage:iv, alive, 893 days
551.0
TCGA-FD-A62P-01A
76 years, male, white, stage:ii, dead, 191 days
548.7
TCGA-DK-A3WX-01A
67 years, female, white, stage:iii, dead, 321 days
548.4
TCGA-XF-AAMY-01A
78 years, male, white, stage:iii, alive, 3011 days
548.3
TCGA-ZF-A9RM-01A
70 years, male, white, stage:ii, alive, 1455 days
542.5
TCGA-FD-A3SP-01A
60 years, male, white, stage:iii, alive, 783 days
541.2
TCGA-FD-A3B7-01A
66 years, male, black or african american, stage:iii, dead, 122 days
536.2
TCGA-R3-A69X-01A
70 years, male, white, stage:iii, alive, 433 days
536.2
TCGA-XF-AAMR-01A
48 years, male, white, stage:iii, alive, 2790 days
535.1
TCGA-GV-A40E-01A
75 years, male, white, stage:ii, dead, 261 days
533.7
TCGA-CF-A3MF-01A
34 years, male, asian, stage:iii, alive, 383 days
526.1
TCGA-4Z-AA7Y-01A
60 years, male, white, stage:ii, alive, 1522 days
522.9
TCGA-DK-AA6R-01A
69 years, male, white, stage:iv, alive, 5041 days
520.9
TCGA-ZF-AA4X-01A
56 years, male, white, stage:ii, alive, 2044 days
516.1
TCGA-DK-A6B5-01A
45 years, male, white, stage:iv, alive, 1542 days
515.8
TCGA-FD-A3SO-01A
68 years, male, white, stage:iv, dead, 168 days
512.4
TCGA-K4-A3WV-01A
77 years, female, white, stage:ii, alive, 646 days
511.9
TCGA-FD-A6TI-01A
73 years, male, white, stage:iv, dead, 294 days
497.2
TCGA-BT-A2LD-01A
78 years, female, white, stage:iv, dead, 623 days
496.4
TCGA-GU-A764-01A
66 years, male, white, stage:ii, alive, 610 days
495.1
TCGA-GC-A3I6-01A
45 years, male, white, stage:iii, dead, 630 days
492.7
TCGA-DK-A3IV-01A
60 years, male, white, stage:ii, dead, 294 days
492.7
TCGA-MV-A51V-01A
75 years, male, white, stage:iii, alive, 410 days
492.6
TCGA-C4-A0F7-01A
77 years, male, stage:iv, dead, 62 days
492.2
TCGA-BT-A3PK-01A
80 years, male, white, stage:ii, dead, 303 days
491.5
TCGA-K4-A6MB-01A
64 years, male, white, stage:iv, alive, 469 days
486.4
TCGA-BT-A0YX-01A
70 years, female, white, stage:iii, dead, 400 days
483.9
TCGA-LT-A5Z6-01A
56 years, male, white, stage:ii, alive, 474 days
481.4
TCGA-GC-A4ZW-01A
71 years, male, white, stage:iii, alive, 15 days
481.0
TCGA-DK-A3IT-01A
62 years, male, white, stage:iii, alive, 648 days
477.1
TCGA-K4-A5RJ-01A
75 years, male, white, stage:ii, alive, 539 days
470.2
TCGA-XF-A9SZ-01A
79 years, male, white, stage:iv, dead, 859 days
469.1
TCGA-DK-A2HX-01A
80 years, female, white, stage:iv, dead, 1420 days
464.0
TCGA-FD-A62S-01A
60 years, female, black or african american, stage:iii, dead, 406 days
446.8
TCGA-HQ-A5NE-01A
56 years, male, stage:iii, dead, 370 days
433.9
TCGA-DK-AA6X-01A
63 years, male, white, stage:ii, alive, 467 days
428.5
TCGA-CU-A0YN-01A
60 years, male, white, stage:iii, dead, 393 days
416.5
TCGA-LC-A66R-01A
78 years, male, white, stage:iv, alive, 466 days
416.3
TCGA-FD-A3N5-01A
69 years, male, black or african american, stage:ii, dead, 685 days
412.4
TCGA-FD-A3SR-01A
68 years, male, white, stage:iv, dead, 602 days
412.0
TCGA-ZF-AA5H-01A
60 years, female, white, stage:iv, alive, 897 days
402.4
TCGA-K4-A5RH-01A
69 years, male, white, stage:iii, alive, 276 days
392.3
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UROTHELIAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.